Ruminococcus bovis: E5Z56_10380
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Entry
E5Z56_10380 CDS
T05998
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ruj
Ruminococcus bovis
Pathway
ruj00750
Vitamin B6 metabolism
ruj01100
Metabolic pathways
ruj01240
Biosynthesis of cofactors
Module
ruj_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
E5Z56_10380 (pdxS)
Enzymes [BR:
ruj01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
E5Z56_10380 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
NanE
IGPS
IMPDH
TetR_C_27
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
QCT07735
UniProt:
A0A4P8XX50
LinkDB
All DBs
Position
complement(2207346..2208221)
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AA seq
291 aa
AA seq
DB search
MSNERFELNKNLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERIPADIRAAGGVSRM
SDPKMIKGIQDAVSIPVMAKCRIGHFAEAQILEAIEIDYIDESEVLSPADDVYHIDKTNF
KVPFVCGAKDLGEALRRINEGASMIRTKGEPGTGDVVQAVKHMRMMQSEIRRLVSMSTDE
LYEAAKQLQVPYNLVQYVHENGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
GNPKKRANAIVKAVTNYNDAKMLAELSEDLGEAMVGINEQEIEILMAERGK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaaagatttgaattaaataagaatttagcacaaatgctaaagggtggcgta
attatggacgttactacacctgaacaggctaagattgctgaagaagcaggtgcttgtgca
gttatggctctagaaagaatcccagctgatattagagctgccggtggtgtttctagaatg
agtgatcctaagatgattaagggtattcaggacgctgtttctattcctgttatggctaag
tgcagaatcggtcactttgcagaagctcagatcctagaagctattgaaattgactacatt
gatgaaagtgaagttctatctcctgctgatgatgtttatcacattgacaaaacaaacttt
aaagtaccatttgtatgtggtgctaaagaccttggtgaggcactaagaagaattaacgaa
ggtgcatctatgattagaactaagggtgaaccgggtacaggtgatgttgttcaggcagtt
aagcatatgagaatgatgcagtctgaaatcagaagacttgtttctatgagtacagatgaa
ctatatgaggctgcaaagcaattacaagttccttacaaccttgttcagtatgttcacgaa
aatggtaagctacctgttgttaactttgctgccggtggtgttgcaactcctgctgatgct
gctctaatgatgcagttaggtgctgaaggtgtattcgtaggttcaggtatctttaagtca
ggcaaccctaagaagagagctaatgctattgttaaggctgttactaactacaatgatgct
aagatgcttgctgaactttctgaagaccttggtgaagctatggttggtatcaacgaacag
gaaattgaaattctaatggctgaaagaggaaagtaa
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