Hungateiclostridiaceae bacterium KB18: A4V00_02395
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Entry
A4V00_02395 CDS
T04437
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ruk
Hungateiclostridiaceae bacterium KB18
Pathway
ruk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ruk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4V00_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruk03400
]
A4V00_02395
Enzymes [BR:
ruk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4V00_02395
DNA repair and recombination proteins [BR:
ruk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4V00_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_16
DUF815
AAA_22
AAA_19
Zot
CEP104_ZnF
Zn_ribbon_6
PIF1
TrwB_AAD_bind
AAA_30
nSTAND_NTPase5
AAA_25
ATPase_2
nSTAND3
Zn_ribbon_3
Headcase
DZR
Motif
Other DBs
NCBI-ProteinID:
ANU52958
LinkDB
All DBs
Position
complement(495862..498306)
Genome browser
AA seq
814 aa
AA seq
DB search
MSTLARIAVENTVYHFDKLFTYLVPEELYKTVRPGVRVTVPFGAGSRERVGMVFDLDGQE
GEGIKTVLSVLDREPVLDREGLGLALWMKNRYYCTLFEAVKLMIPAGLHFRLKDSYVLSA
GFTDFDRENYDGLSWQIIMALRSHGRAMPMEKLSAALGITRDCPEFKALQAGGVVCRVNL
AMNRVKDAVSKMVRPIPGFDGRLTPRQREVYGVLCDVGEVSEKELCYFTGASPAVVKALC
EKGAAEVFQYEIYRRPEALAAEEDNDDLILSESQQKALEELTEEYENAREGSRCALLYGV
TGSGKTSVYLKLIDHVLAKGRGVIVMVPEISLTPQTLRRFQSRFGDQVAVFHSGLSLGER
MDEWRRVRQGRARIAVGTRSAVFAPVQKLGLIVIDEEQEHTYKSEASPRYDAREVARYRC
ARSDAFCLLSSATPSVETFHMAREGRFRFHKLEDRFGRAVMPEVQLVDMNWEDHPGSEHA
VGMALGEALIENFRRGKQSIVLLNRRGYHTFASCRSCREVVSCPNCSISLTYHTANRRFM
CHYCGYSAPLMKKCPSCGSEGLAFRGLGTQKAEEQLRELLPKARILRMDTDSMSGRYSLE
RSLHEFARGEYDVMVGTQMVAKGLDFENVTLVGVISADQTLYSDDFRSGERTFDLLTQVV
GRAGRGRLPGRAVIQTFAPENPVLGLAAKQDYFGFAERELAYRKAMLYPPFVDLLVIGFV
GGDEKLTRRSAERFLQELEGLARGEYAGLPLRVLRPSPAAIARVSGKYRYKLIIKCQNGP
RFREMIARLLTAFAGLREFRQVTVYADPNPNRII
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcttgcccgaatagcggtggaaaatacggtttatcattttgataagctgttc
acctatctggtgcccgaggaactttacaagacggtacggcccggcgtgcgtgtgacggtg
ccctttggagcggggagccgcgagagggtgggcatggtgttcgatctggacggccaagag
ggcgaaggcataaagacggttttatccgtgctggaccgcgagcctgtcctggaccgggag
ggccttgggctggctctgtggatgaagaacaggtactactgcacccttttcgaggcggtc
aagctgatgatcccggcggggctgcacttcaggctgaaggacagctatgtgctaagcgcc
ggctttaccgactttgaccgggagaactatgacggactgtcctggcaaataatcatggcc
cttcgctcccacggccgggcgatgcccatggaaaagctctcggcggctctgggcataacc
cgggactgcccggaatttaaggccttacaggccgggggcgttgtatgccgggtaaacctt
gccatgaaccgggtaaaggacgccgtctccaagatggtgcgtcccataccgggctttgac
ggcaggctgacccccaggcagagggaggtgtacggtgtgctctgcgacgtgggcgaggtc
tctgagaaggagctgtgctattttaccggggcatctccggcggtagtcaaggccctctgc
gaaaagggcgcggcggaggtattccagtacgagatctaccggcggcccgaggcccttgcc
gcggaggaggacaatgatgatctgatactgtccgaaagccagcagaaggcgctggaggaa
ctgaccgaagaatatgagaacgccagggagggcagccgctgcgccctgctgtacggtgtg
acaggcagcggcaagacctcagtgtaccttaagcttatagaccatgtgctggcaaaaggc
cggggcgttatcgtgatggtgccggagatatccctgaccccacagaccctgcgccggttc
cagagccgcttcggggatcaggtggccgtgttccacagcggcctgtccctgggcgagcgc
atggacgagtggaggagggtgcgtcagggcagggccaggatagcggtggggacccgctcg
gcggtttttgcgccggtgcaaaagctgggccttatcgtcatcgatgaggagcaggagcac
acctataagtctgaagccagcccccgctacgacgccagggaggtggcccgctaccgctgc
gccaggtccgacgctttctgcctgctctcgtcggcaacgccttcggtggagaccttccat
atggcccgggaggggaggttccgctttcataagctggaggaccgcttcggcagggccgta
atgccggaggtccagctggtggatatgaactgggaggaccacccgggcagcgagcacgcg
gtgggcatggctctgggggaggcgctgatagaaaatttccggcggggcaagcagtctatt
gtgctgctgaaccgccggggctaccacacctttgccagctgtcggagctgcagggaggta
gtaagctgcccaaactgcagtatttcgttgacatatcatacggccaaccgccgttttatg
tgccattactgcgggtattcggcgccgcttatgaaaaaatgcccctcctgcggcagcgag
ggacttgctttcagggggctgggcacccagaaagccgaggaacagttaagggagctgctg
ccaaaggccaggatcctgcggatggacaccgactccatgtcgggccggtactccctggag
cggagccttcatgagttcgcccggggggagtacgacgttatggtgggcacccagatggtg
gccaaggggctcgactttgaaaacgtgaccctggtgggggtgatatcggccgaccagacc
ctttacagcgacgatttcagaagcggcgaaaggacctttgacctgctgacccaggtggtg
ggccgggcgggacggggcaggctcccgggccgggcggtgatacagaccttcgcgccggaa
aacccggtgctggggcttgcggcgaagcaggactatttcggctttgccgaaagggagctt
gcctatagaaaggccatgctctacccgccctttgtggacctgctggtcatcggctttgtg
ggcggggacgaaaagcttacgcgccggtccgcagaacgttttttacaggagctggagggc
cttgcaaggggcgaatacgcgggcctgcccctgcgggtgctgagaccctccccggcggcc
atagccagggtgagcggcaaataccgctataagctcataataaagtgccaaaacggccca
aggttccgggagatgatcgcaaggctgcttaccgccttcgcggggctcagggagtttcgg
caggtgacggtctatgcggacccgaacccgaaccgcatcatatag
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