Hungateiclostridiaceae bacterium KB18: A4V00_04320
Help
Entry
A4V00_04320 CDS
T04437
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ruk
Hungateiclostridiaceae bacterium KB18
Pathway
ruk00260
Glycine, serine and threonine metabolism
ruk00460
Cyanoamino acid metabolism
ruk00630
Glyoxylate and dicarboxylate metabolism
ruk00670
One carbon pool by folate
ruk00680
Methane metabolism
ruk01100
Metabolic pathways
ruk01110
Biosynthesis of secondary metabolites
ruk01120
Microbial metabolism in diverse environments
ruk01200
Carbon metabolism
ruk01230
Biosynthesis of amino acids
ruk01240
Biosynthesis of cofactors
ruk04981
Folate transport and metabolism
Module
ruk_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ruk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A4V00_04320 (glyA)
09102 Energy metabolism
00680 Methane metabolism
A4V00_04320 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A4V00_04320 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A4V00_04320 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A4V00_04320 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A4V00_04320 (glyA)
Enzymes [BR:
ruk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A4V00_04320 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ANU53317
LinkDB
All DBs
Position
complement(872509..873765)
Genome browser
AA seq
418 aa
AA seq
DB search
MYKDLMDTIGFVAETDPEVADAMSRELSRQRRNLELIASENIVSPAVMAAMGTVLTNKYA
EGYPGHRYYGGCQCVDIAEDIARERACKLFGAQHANVQPHSGAQANLAVYFAFLQPGDTV
LGMNLSEGGHLSHGSPVNMSGALYNFVAYGVEPDTGRINYDKVMDLAMKEKPKLIVAGAS
AYARAIDFSRFREIADACGAKLMVDMAHIAGLVAAGCHQNPVPYADVVTTTTHKTLRGPR
GGLILCREEYAKAIDKAIFPGTQGGPLEHIIAAKAVCLGEALKPEFKEYGQQVVKNAAAL
AEGLMKRGVKLVSGGTDNHLMLVDLSGLELTGKELERRLDEVYITANKNTVPGEQRSPFV
TSGLRLGTPAVTTRGLKEDDMDRVAECIALAMEEGFEDKVEKLRGMVEDICKKYPLYE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggatctgatggataccatcggctttgtggccgagaccgacccggaggtagcg
gacgccatgtcgcgggagctctcacgccagcggcggaatctggagcttatcgcctcggag
aacatcgtctccccggcggtgatggcggccatgggcacggtgcttaccaacaagtacgcc
gagggctaccccggccacaggtactacggcgggtgccagtgcgtggatattgccgaggac
atcgccagagagcgggcctgtaaactcttcggggcccagcacgccaacgtccagccccac
tccggggcccaggccaacctggcggtgtacttcgcgttcctacagcccggggacacggtg
ctgggcatgaacctgtccgagggcgggcacctgtcccacggctcgccggtgaatatgtcc
ggggccctctacaattttgtcgcctacggcgtggagccggacaccgggcgcataaactat
gacaaggtgatggatcttgccatgaaggagaagccgaagctcatagtggccggggccagc
gcctatgccagggccatagacttctcaaggttccgagagatagcggacgcctgcggggcg
aagctgatggtggacatggcgcatatcgcgggcttagtggccgccgggtgccatcagaac
ccggtgccctacgccgacgtggtgaccaccactacccataagaccctaagaggtcccagg
ggcgggctgatactctgccgggaggagtacgcaaaggccatagacaaggctatattcccc
ggcacccagggcggtcctcttgagcatattatcgccgccaaggccgtatgtttaggtgag
gccctaaagccggaatttaaagagtatggacagcaggtggtaaagaacgcggcggcgctg
gccgaggggcttatgaagcgtggcgtaaagctggtgtccgggggcacggacaatcacctt
atgctggtggacctctccgggctggagctcacaggcaaggagctggagcgcaggcttgac
gaggtgtatatcaccgccaacaagaacactgtgcccggggagcagcgcagccccttcgtc
accagtggcctgcggctggggaccccggcggtgaccaccagggggctcaaggaggacgac
atggaccgggtggccgagtgcatagccctggctatggaggagggcttcgaggataaggta
gagaagctccggggcatggtagaggacatctgtaaaaaataccccctgtacgagtaa
DBGET
integrated database retrieval system