KEGG   Hungateiclostridiaceae bacterium KB18: A4V00_04995
Entry
A4V00_04995       CDS       T04437                                 
Name
(GenBank) helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ruk  Hungateiclostridiaceae bacterium KB18
Pathway
ruk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ruk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A4V00_04995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ruk03400]
    A4V00_04995
Enzymes [BR:ruk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     A4V00_04995
DNA repair and recombination proteins [BR:ruk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A4V00_04995
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 OB_YrrC SH3_13 UvrD_C_2 AAA_11 Viral_helicase1 PIF1 HHH_5 AAA_22 UvrD-helicase T2SSE nSTAND3 NAT10_TcmA_helicase UvrD_C TrwB_AAD_bind DEAD MeaB PhoH NPHP3_N AAA_29 ABC_tran RsgA_GTPase AAA_16 AAA NTPase_1 CbiA SLFN-g3_helicase SRP54 AAA_28 AAA_5 ResIII HerA_C Thymidylate_kin AAA_12 MobB nSTAND_NTPase5 Zeta_toxin Mg_chelatase KAP_NTPase TsaE cobW
Other DBs
NCBI-ProteinID: ANU53444
LinkDB
Position
complement(1009190..1011415)
AA seq 741 aa
MEESGLLELCGQVEHVVYRNEKNQYTVLVLLAGEDREEVTVVGTIPMVSDGEELKVYGRW
EQNQSYGRQFRAEIFEHARPVTEEGMLRYLSSGAVKGVGRVLAGRIIDTFGANALEVIEH
DPTRLAQIKGITEEKAKEISEEYKRIYGVRELMVYLGAFGVTPEVSMLVWKKYGDESISC
VQEDPYSLCAPEIGLGFQIADQIAQSMERPQDDMSRVQAGVVYVIRHNVNNGHTCVPRDA
LIKVAAKLLGVDPELAGDAVEELWGSFVLMQEVFGGREYLFLQQQHLCEQYIAGRMKAML
RAPANAIAGADMHIGTIEEREGIKYAGKQREAIKAAMEQGVLILTGGPGTGKTTTLNAII
RILKQAGERVLLAAPTGRAAKRMSELTGEESKTIHRMLQVDWDERDQPFFNRNERNPLEC
ECLVIDEMSMVDAYVFESVLRALPIGCRLILVGDSDQLPSVGAGNVLGDLIAAGLFPTVQ
LKEVFRQSLESLIITNAHRIVAGEMPEMRRRDGDFFFLPGGGPEQARELVAALCGTRLPK
SYGYSPFEDIQVLCPSRKGELGTVELNKLLRETVNPPKEGKSQVKISGQLFREGDKVMQV
RNDYQLPWSREDGSEGQGVYNGDMGVITRIDKPGGAIEVRTDDRLVVYDFEKAGEELEPA
YAVTVHKSQGNEFNAVIIPVMRVPRQLCYRNLFYTAVTRAKKLLILVGESGVVREMVQND
RKTQRITGLREFLTRDNAAEL
NT seq 2226 nt   +upstreamnt  +downstreamnt
ttggaggaaagcggccttttggagctatgcggccaggtggaacacgtggtgtaccgcaat
gaaaagaatcagtataccgtgctggtgctccttgccggggaggaccgggaggaggtcact
gtggtggggaccatacccatggtcagcgacggtgaggaactgaaggtctacggccgctgg
gagcagaaccagagctatggccgccagtttagggcagagatattcgagcacgcccgcccg
gttacagaggaggggatgctcagatacctgtcctccggcgcggtgaagggcgttggccgg
gtactggccgggcgcattatcgacacctttggggccaacgccctggaggttatcgagcac
gaccccacaaggctcgcccagataaagggcataaccgaggaaaaggcgaaggagataagc
gaggagtataagcggatatacggcgtgcgggaactgatggtataccttggggccttcggc
gtaaccccggaggtctccatgctggtctggaaaaagtacggcgacgagtccatctcctgc
gtgcaggaggacccctacagcctgtgcgcgccggagataggactgggcttccagatcgca
gaccagatcgcccagtctatggagcgcccacaggacgatatgagccgggtacaggccggg
gtggtgtacgttataaggcacaacgtgaacaacggccatacatgtgtgccaagggacgcg
ctcataaaggtggcggcgaagcttttgggggtggacccggagctggccggggacgcggta
gaggagctctgggggagctttgtgctcatgcaggaggtgttcggcgggcgggagtacctg
tttttacagcagcagcacctgtgcgagcagtacatagcagggcgcatgaaggctatgctc
cgggcccccgccaacgccatcgccggggcggacatgcacatcgggaccatagaggagcgc
gagggcataaaatatgccggcaagcagagggaggccataaaggccgccatggagcagggg
gtgctgatactcaccggcgggccgggcacgggaaagaccaccaccttgaacgccattata
cgcatactaaaacaggccggagagcgggtcctgttggccgcgcccacagggcgggccgca
aagcgcatgagcgagctcaccggcgaggagtccaagaccatacaccgtatgttacaggtg
gactgggacgagcgggaccagcccttcttcaaccgcaacgagcgcaatcctctggagtgc
gagtgcctggtgatagatgagatgtccatggtggacgcctatgttttcgagagcgtttta
agggctctgcccataggctgccggctgatactggtgggggacagcgaccagctgccgtcg
gtgggggccgggaacgtgctgggggacctgatagccgcggggctgttccccacggtgcag
ctgaaagaggtgttcaggcagtcccttgagagccttatcatcaccaacgcccacaggata
gtggccggggagatgccggaaatgcgccggcgggacggggatttcttcttcctgcccggc
ggcgggccggagcaggcacgggaactggtggcggccctctgcggcacaaggctgccgaaa
agctacggctattcgccctttgaggacatacaggtgctctgcccctcgagaaagggggaa
ctgggcacggtggagctaaataagctcctgcgggagacggtgaaccccccaaaggagggc
aagtcccaggtgaagataagcggccagcttttcagggagggcgacaaggttatgcaggtg
cgaaacgactaccagctgccctggagcagggaggacggctctgagggccagggggtctat
aacggcgatatgggcgttatcacccgcatagacaagcccggcggggccatagaggtgagg
acagacgacaggctggtggtatatgacttcgaaaaggccggggaggagctggagcccgcc
tatgccgtcaccgtccacaagagccagggcaacgagttcaacgcggtgataatcccggtg
atgagggtgcccaggcagctctgctaccgcaacctgttctacacggcggtgacaagggca
aagaagcttttgatactggtgggcgaaagcggagtggtgcgggagatggtgcagaacgac
cgcaagacccagcgcatcacggggcttcgggagttcctgacccgggacaacgcggcggag
ctttaa

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