Hungateiclostridiaceae bacterium KB18: A4V00_08650
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Entry
A4V00_08650 CDS
T04437
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ruk
Hungateiclostridiaceae bacterium KB18
Pathway
ruk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ruk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V00_08650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ruk03019
]
A4V00_08650
03016 Transfer RNA biogenesis [BR:
ruk03016
]
A4V00_08650
Enzymes [BR:
ruk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A4V00_08650
Messenger RNA biogenesis [BR:
ruk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4V00_08650
Transfer RNA biogenesis [BR:
ruk03016
]
Prokaryotic type
tRNA degradation factors
A4V00_08650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
SPATA25
Motif
Other DBs
NCBI-ProteinID:
ARE60626
LinkDB
All DBs
Position
1733232..1735424
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AA seq
730 aa
AA seq
DB search
MFENFKRYETDFAGRPLVIETGKMAQLANGECLVRYGDTVVHVAATASAKPRDGIDFFPL
SVDFEEKLYSVGKIPGSFLKREGRPSEKATLVCRMIDRPIRPLFPKDMRNDVAIVCTVMS
VDQDCSPEIAALVGTSIALTISDIPWSGPISGVSVGLIDGQFIINPDAEQRKLSQMAVTV
ASTTERIAMIEAGANEVSDEDMYNGIMAGHEANQHILEFIKGIQAEIGKEKFEYPSNEPE
PEMFEAIKAFAEDDVRAAMDTDDKTIRDARLRPIYEKVHERFDPEYPEQEAKIDECMYKT
QKYVVRRWLLDEQKRVDGRGMDEMRPLAAEVGLLPRTHGSGMFTRGQTQVLTVATLGSIR
DNQLLDGIDEEESKRYIHHYNFPSYSVGETRPSRGPGRREIGHGALAERALVPVVPGMDE
FPYTLRLVSEVLSSNGSTSQASICGSTLALMDAGVPIKAPVAGISCGLITEGDRWMTMVD
IQGVEDFFGDMDFKVGGTKKGITAIQMDLKISGLLPEMVKEALEKTHKARNYIIDEIMLK
AIPEVRPELSPYAPKMLSMQIPVDKIREVIGTGGKVIQKICAECEITMDVEEDGHVFITG
IDLEKCRRAMDIVDTIVNDPEPGSYYNGRVTRLMDFGAFVEIAPGKEGLVHISRLDIRRT
EKVTDVVNVGDVVKVKVLEIDDKGRLNLSRRDALIDLDGAVPENDISADRPPRRDHDHDR
RPPRRDHDRR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaactttaaacgctatgagaccgactttgccgggcgccccctggtgatagag
accggcaagatggcccagcttgcaaacggtgagtgcctggtgcgatatggcgacaccgtc
gtgcacgtggccgccaccgcctccgcgaagccccgtgacggcatcgacttcttcccactt
tcagtggacttcgaggaaaaactctactccgtgggcaagataccgggctcgttcctcaaa
agggagggccgccccagcgagaaggccactctggtatgccgcatgatagacaggcccata
cgccccctgttccccaaggatatgcgcaacgacgttgctatcgtctgcaccgtcatgtcc
gtagaccaggactgttccccggagatcgccgccctggtgggcacctccatcgccctgacc
atttcagatatcccctggagcgggcccatatccggcgtgtctgtggggcttatcgacggc
cagttcatcatcaaccccgacgctgagcagcgcaagctttcccagatggcggtgacagtc
gcctccaccaccgagcgtatagccatgatagaggccggggccaatgaagtctccgacgag
gatatgtacaacggcattatggccggacacgaggcgaaccagcatattctggagtttata
aagggcatacaggctgagataggcaaggagaagttcgagtaccccagcaacgagcccgag
ccggagatgttcgaggccatcaaggcctttgccgaggacgacgtgcgcgccgccatggac
accgacgacaagaccataagggacgcaaggctgcgccccatatacgagaaagtgcacgaa
cgctttgacccggagtacccggagcaggaggcgaagatagacgagtgcatgtataagacc
cagaagtacgtggtgcgccgctggcttttagacgagcagaagcgggtggacggccgcggc
atggacgagatgcggcccctggcggcagaggtcggactgctgcccaggacccacggctcc
ggtatgttcacaaggggccaaacccaggtgctcaccgtggcgactttgggctccataagg
gacaaccagcttctggacggcatagacgaggaggagagcaagcgctatatccatcactat
aatttcccctcctactccgtgggcgagacccggcccagtcgaggcccgggacggcgtgag
ataggccacggagctctcgcagagcgggctctggtaccagtggtgccggggatggacgag
ttcccctataccctccgactggtgtccgaggtgctcagctccaacggctcaacgtcacag
gcctccatctgcggctcgaccctggccttgatggacgcgggcgtgcccatcaaggcccct
gtggcgggtatctcctgcggccttatcaccgagggggaccgctggatgaccatggtggac
atccagggggttgaggacttcttcggggacatggactttaaggtgggcggcaccaagaag
ggcataaccgccatacagatggacctgaagatatccggcctgctgcctgagatggtgaag
gaggccctggagaagacccataaggccaggaactatatcatagacgagataatgctcaag
gccataccagaggtgcggcccgagctgtcgccctatgcgcctaagatgctttctatgcag
atacccgtcgacaaaatccgagaggtcatcggcacaggcggcaaagtcatacagaagatc
tgcgccgagtgcgagatcaccatggacgtggaggaggacggccatgtgttcatcaccggc
attgaccttgagaagtgccgccgggccatggacattgtggacaccatcgtcaacgacccg
gaaccgggcagctactataacggccgggtcacaaggctgatggacttcggcgcctttgtg
gagatagccccgggcaaagagggccttgtgcatatctcaaggctggatatccggcgcaca
gagaaggttacggacgtggtgaacgtgggcgacgtggtaaaggtaaaggtactggagata
gatgataagggccggctgaacctatccagaagggacgcgcttatcgacttggacggcgcg
gtgcccgagaacgatatcagcgcggacaggccgcccagacgcgaccatgaccatgaccgc
aggccgcccagaagggaccacgaccgcagataa
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