Hungateiclostridiaceae bacterium KB18: A4V00_10695
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Entry
A4V00_10695 CDS
T04437
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ruk
Hungateiclostridiaceae bacterium KB18
Pathway
ruk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ruk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V00_10695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ruk03019
]
A4V00_10695
Messenger RNA biogenesis [BR:
ruk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4V00_10695
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ANU56066
LinkDB
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Position
2136703..2138460
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AA seq
585 aa
AA seq
DB search
MTAAAQRAQQQIAARGAAAAQPKRGRGRPRKSQKPPVKVYFLGGLNEIGKNFTLYECQGD
MVIVDCGLAFPDEEMLGVDLVIPDFTFVEKNREKIRGVVITHGHEDHIGAVPYLLKKLNV
PVYGTALTIGLIESKLKEHNLTASAKLKVTPPGSHIKLGCFEVEFIHVNHSIADSVALAL
HTPAGVLVHTGDFKIDCTPEEGEMIDLCRFAELGKEGVLALLMDSTNAERPGYTQTEQTV
NNSLDALFMRAEGKRIIVATFASSISRVQMIINCAVKYGRKVALSGRSMVNVMGIASELG
YLDIPDGVLVDLNLINRYEPGQLVLITTGSQGEPMSALTRMAFSDHRQVAIGPGDFIILS
ARPIPGNEKTVGAVVDELLKQGCTVIYESMYEVHVSGHACQEELKLIHGLVKPRFFIPVH
GEQKHLQKHAGLAMAMGMDRKDIFIGDIGNVLELHEDHMKQLAEVPAGSVMVDGLGVGDV
GSVVLRDRKHLAEDGLIVAVCSIESETGHVAAGPDIVSRGFVYVRENEPLMEEARRVVYR
ALEDCANHRVRDWSDMKQSVKDELSKFLYRKTQRNPMILPIIMEV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggcggcccagagggcccagcagcagatagccgccaggggcgcggcggcagcc
cagcccaagcgcggaaggggccgcccaagaaagtctcagaagcccccggtgaaggtgtac
ttcttaggggggctcaacgagatagggaagaactttaccctctatgagtgccagggggat
atggtcatagtggactgcggccttgctttcccggacgaggagatgctgggcgtggacctg
gtgataccggactttacttttgtagagaagaaccgggagaagataaggggcgtggttata
acccacggacacgaggaccatatcggcgcggtgccataccttttaaagaagctcaacgtg
ccggtatacggcacggccctgaccatagggcttatagagagcaaattgaaggagcacaac
ctgactgcttctgcaaaactgaaggtgacgcctccgggcagtcatataaagcttggatgc
tttgaggtggagtttatccatgtgaaccactccatcgccgactccgtggccctggccctg
cacaccccggcgggggtgctggtgcacaccggggacttcaagatagactgcacccccgag
gagggggagatgatagacctctgccgctttgcggaactgggcaaggagggggtattggcc
ttactcatggattccaccaacgccgagcgtccgggctatacccagaccgagcagacggtg
aacaactccctggacgcgctattcatgcgggccgagggcaagcggataattgtcgccacc
ttcgcctccagcatcagccgggtgcagatgataataaactgcgcggtgaaatacgggcga
aaggtggccctctccggacgcagcatggtaaacgtgatgggcatcgccagcgagctgggg
tatcttgacatccctgacggggtgctggtggacctgaaccttataaaccgctatgagcca
ggacagctggtgcttataaccaccggcagccagggggagcccatgtcggccctgacccgc
atggccttctccgaccacaggcaggtggccataggccccggggactttataatactgtcc
gcccggccaatacccggcaacgagaagaccgtgggggccgtggtagacgagcttttgaag
caggggtgcacggtgatatacgagtccatgtacgaggtgcacgtgtccggccacgcctgt
caggaggaattaaagctcatacacggccttgtgaagcccaggttctttattcccgtgcat
ggcgagcagaagcatttgcagaagcacgcgggtttagcaatggccatgggcatggaccgc
aaggacatctttatcggggacatcggcaacgtgctggagctgcacgaggaccatatgaaa
cagctggcggaggtgcccgcgggcagcgtcatggtggacggcctgggggtcggcgacgtg
ggcagcgtggtcctccgggaccgcaagcacctggcggaggacggacttatcgttgcggtg
tgctccatcgagtccgagaccgggcacgtggccgccgggcccgatatcgtctccagaggg
ttcgtatacgtgcgggagaacgagccgctgatggaggaggcccgccgggtggtctatagg
gcccttgaggactgcgcgaaccaccgggtgcgggactggagcgacatgaagcagagcgtt
aaagacgagctgtcaaagttcctgtaccgaaagacccagagaaatccgatgatactgccc
ataatcatggaggtataa
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