KEGG   Hungateiclostridiaceae bacterium KB18: A4V00_10695
Entry
A4V00_10695       CDS       T04437                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ruk  Hungateiclostridiaceae bacterium KB18
Pathway
ruk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ruk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A4V00_10695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ruk03019]
    A4V00_10695
Messenger RNA biogenesis [BR:ruk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A4V00_10695
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ANU56066
LinkDB
Position
2136703..2138460
AA seq 585 aa
MTAAAQRAQQQIAARGAAAAQPKRGRGRPRKSQKPPVKVYFLGGLNEIGKNFTLYECQGD
MVIVDCGLAFPDEEMLGVDLVIPDFTFVEKNREKIRGVVITHGHEDHIGAVPYLLKKLNV
PVYGTALTIGLIESKLKEHNLTASAKLKVTPPGSHIKLGCFEVEFIHVNHSIADSVALAL
HTPAGVLVHTGDFKIDCTPEEGEMIDLCRFAELGKEGVLALLMDSTNAERPGYTQTEQTV
NNSLDALFMRAEGKRIIVATFASSISRVQMIINCAVKYGRKVALSGRSMVNVMGIASELG
YLDIPDGVLVDLNLINRYEPGQLVLITTGSQGEPMSALTRMAFSDHRQVAIGPGDFIILS
ARPIPGNEKTVGAVVDELLKQGCTVIYESMYEVHVSGHACQEELKLIHGLVKPRFFIPVH
GEQKHLQKHAGLAMAMGMDRKDIFIGDIGNVLELHEDHMKQLAEVPAGSVMVDGLGVGDV
GSVVLRDRKHLAEDGLIVAVCSIESETGHVAAGPDIVSRGFVYVRENEPLMEEARRVVYR
ALEDCANHRVRDWSDMKQSVKDELSKFLYRKTQRNPMILPIIMEV
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgaccgcggcggcccagagggcccagcagcagatagccgccaggggcgcggcggcagcc
cagcccaagcgcggaaggggccgcccaagaaagtctcagaagcccccggtgaaggtgtac
ttcttaggggggctcaacgagatagggaagaactttaccctctatgagtgccagggggat
atggtcatagtggactgcggccttgctttcccggacgaggagatgctgggcgtggacctg
gtgataccggactttacttttgtagagaagaaccgggagaagataaggggcgtggttata
acccacggacacgaggaccatatcggcgcggtgccataccttttaaagaagctcaacgtg
ccggtatacggcacggccctgaccatagggcttatagagagcaaattgaaggagcacaac
ctgactgcttctgcaaaactgaaggtgacgcctccgggcagtcatataaagcttggatgc
tttgaggtggagtttatccatgtgaaccactccatcgccgactccgtggccctggccctg
cacaccccggcgggggtgctggtgcacaccggggacttcaagatagactgcacccccgag
gagggggagatgatagacctctgccgctttgcggaactgggcaaggagggggtattggcc
ttactcatggattccaccaacgccgagcgtccgggctatacccagaccgagcagacggtg
aacaactccctggacgcgctattcatgcgggccgagggcaagcggataattgtcgccacc
ttcgcctccagcatcagccgggtgcagatgataataaactgcgcggtgaaatacgggcga
aaggtggccctctccggacgcagcatggtaaacgtgatgggcatcgccagcgagctgggg
tatcttgacatccctgacggggtgctggtggacctgaaccttataaaccgctatgagcca
ggacagctggtgcttataaccaccggcagccagggggagcccatgtcggccctgacccgc
atggccttctccgaccacaggcaggtggccataggccccggggactttataatactgtcc
gcccggccaatacccggcaacgagaagaccgtgggggccgtggtagacgagcttttgaag
caggggtgcacggtgatatacgagtccatgtacgaggtgcacgtgtccggccacgcctgt
caggaggaattaaagctcatacacggccttgtgaagcccaggttctttattcccgtgcat
ggcgagcagaagcatttgcagaagcacgcgggtttagcaatggccatgggcatggaccgc
aaggacatctttatcggggacatcggcaacgtgctggagctgcacgaggaccatatgaaa
cagctggcggaggtgcccgcgggcagcgtcatggtggacggcctgggggtcggcgacgtg
ggcagcgtggtcctccgggaccgcaagcacctggcggaggacggacttatcgttgcggtg
tgctccatcgagtccgagaccgggcacgtggccgccgggcccgatatcgtctccagaggg
ttcgtatacgtgcgggagaacgagccgctgatggaggaggcccgccgggtggtctatagg
gcccttgaggactgcgcgaaccaccgggtgcgggactggagcgacatgaagcagagcgtt
aaagacgagctgtcaaagttcctgtaccgaaagacccagagaaatccgatgatactgccc
ataatcatggaggtataa

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