Hungateiclostridiaceae bacterium KB18: A4V00_13420
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Entry
A4V00_13420 CDS
T04437
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ruk
Hungateiclostridiaceae bacterium KB18
Pathway
ruk03030
DNA replication
ruk03410
Base excision repair
ruk03420
Nucleotide excision repair
ruk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ruk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4V00_13420
03410 Base excision repair
A4V00_13420
03420 Nucleotide excision repair
A4V00_13420
03440 Homologous recombination
A4V00_13420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ruk03032
]
A4V00_13420
03400 DNA repair and recombination proteins [BR:
ruk03400
]
A4V00_13420
Enzymes [BR:
ruk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4V00_13420
DNA replication proteins [BR:
ruk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A4V00_13420
DNA repair and recombination proteins [BR:
ruk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A4V00_13420
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4V00_13420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
XPG_I
HEAT_HEATR1
Motif
Other DBs
NCBI-ProteinID:
ANU54936
UniProt:
A0A1C7GT09
LinkDB
All DBs
Position
complement(2656413..2658980)
Genome browser
AA seq
855 aa
AA seq
DB search
MKLLVLDGNSLLNRAFFGIKLLSTKSGDFTNGIYGFLTMFRKIYDETEPDAVAIAFDMRA
PTFRHKQYAGYKSNRKGMPEELAQQLPVLQQLLKDLGYRIVTCEGWEADDILGTLSAAAE
REGSACVIATGDRDSLQLVSSATTVRLMSTKFGQPQVTVYDEAKIMEEYGVTPHQMIDLK
ALQGDSSDCIPGVAGIGPKGAGELVQKYGSLENIYNNLDDPEIKPAARRKLEASKDNAFM
SYELGTIRRDAPIETDLSQYVPTSGDPQSAGSTMVRLELFSLIEKFGLTAAPAQETTVAA
GRPEVIELPDGAPLLARLEDAGAACFYCHWDKSGELLSLIFAHKDILWRVTPDSAFLLAF
FTNPLIKKHTHDIKPLHRLALSMGCKLESVSLDTALAAYLLNPSATGYDVLRLAAEYSVP
LPDFEQEEYNCAAVMPGLCQALQKAIDGNNQRELLENIEIPLSFVLAQMEHIGFYVDSES
IKEYGEKLQKEVESLHDSIIEQVGYDFNINSPKQLGEALFEKLGLPHGKKTKSGWSTNAD
VLESLRPMNPVVDEILRYRTVAKLKSTYCDGLLKVIGPDGRIHSSFNQTETRTGRISSTE
PNMQNIPVRTPIGRELRKFFAAEHGVLVDADYSQIELRVLAHVANDPAMREDFLQGHDIH
ASTAARVFNMPQELITSQLRSRAKAVNFGIVYGIGAYSLSQDIGVSVKEADAYIKEYLRN
YSGVDAYMKEVADSARETGYVEDMFGRRRYLPELKSSNFNMRSFGERVARNMPIQGAAAD
IIKIAMIRVSRRLEAEGLKARMILQVHDELIVECPQQEQEQVKALLTEEMEQAVNLSVPM
VAEANAGKTWYDAKG
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttttagtcctcgacggcaacagcctcctcaaccgcgccttcttcggcatcaag
ctcctctccaccaagtccggcgacttcaccaacggcatctacggctttctcaccatgttc
cgaaaaatttatgacgaaaccgagcccgacgccgttgccatcgccttcgatatgcgggcc
cccaccttccgccacaagcagtacgccggctataagtccaaccgcaagggtatgcccgag
gagctggcccagcagctcccggtccttcagcagcttctaaaggaccttggctaccgcata
gtcacctgcgagggctgggaggccgatgacattttgggcaccctctccgccgccgccgag
cgggagggcagcgcctgcgtcatcgccaccggcgaccgggacagcctgcagctggtctcc
tccgccaccaccgtccggctcatgagcaccaagttcggccagccccaggtgacggtctac
gacgaggccaaaattatggaggagtacggcgtgaccccccatcagatgattgacctcaag
gccctccagggcgacagctccgactgcatccccggcgtggcgggcatcggccccaagggc
gcgggggagctggtgcagaagtacggctccctggaaaatatctacaataatctcgacgac
ccggagataaagcccgccgcccgcaggaagcttgaagcttcaaaggacaacgcctttatg
agctacgagctgggcaccatccgccgggacgcgcccattgagacggacctctcccagtat
gtccccacctccggcgacccccagagcgccgggagcacaatggtgcgcctggagctattt
tccctgatagaaaagtttggccttaccgccgcgcccgcccaggagaccaccgtcgccgcg
ggcagacccgaggtcatagagctcccggacggcgcgcccctgctggcccggcttgaggac
gcgggcgcggcctgcttctactgccactgggacaagtccggggagctcctgtcacttatc
ttcgcccacaaggacattttgtggcgtgtcaccccggacagtgcgtttttactggccttc
ttcaccaaccccctcataaaaaagcacacccacgacataaagcccctgcaccggctggcc
ctcagtatgggctgcaagctcgagtccgtctctctggacacggccctggcggcatacctt
ctgaacccctcggccaccggctacgacgtactgcggctggcggcggaatactccgtgccc
ctgccggacttcgagcaggaggaatataactgcgcggcagttatgcccggcctatgccaa
gcccttcaaaaggccatcgacggcaataaccagcgggagcttttggaaaacatcgagata
ccattaagctttgtcctggcccagatggagcatattggtttctatgtggacagcgaaagc
ataaaggagtacggagagaagctccaaaaagaggtggagagcctgcacgactccatcatt
gagcaggtggggtacgacttcaacatcaactcccccaagcagctgggcgaagcccttttc
gagaagctgggcctgccccacggaaaaaagaccaagtccggctggtccaccaatgcggac
gtgctggaatccctgcggcccatgaacccggtggtggacgagatactccgttaccgcacg
gtggcaaagctcaagtccacctactgcgacggactcttgaaggtgatcggccccgacggc
cgaatacactccagctttaaccagaccgagacccgcaccggccgcatctccagcaccgag
cccaatatgcagaacatccccgtgcgcacccccatcggccgggagctccgcaagttcttc
gccgccgagcacggcgtgcttgtggacgcggactacagccagatagagcttagggtcctg
gcccatgtggccaacgaccccgccatgcgggaggactttttgcagggccacgacatccac
gcgtcaactgccgccagggtcttcaatatgccccaggagctcatcacctcgcagcttcgc
agccgggcaaaggcggtgaacttcggcatagtctacggcatcggggcctactccctgtcc
caggatatcggggtcagcgtcaaggaggcggacgcttatattaaagagtacctgcgcaac
tactccggggtggacgcctacatgaaggaggtggcggacagcgcccgggagacagggtac
gtagaggatatgttcggccgcaggagatacctgccggagctcaagagcagtaacttcaat
atgcgctccttcggggagcgtgtagccaggaatatgcccatacagggggcggcggcggat
atcatcaagattgccatgataagggtaagcaggcggctggaggccgagggtctaaaggcc
cggatgatacttcaggtccacgacgagctgatagtggagtgcccccagcaggagcaggag
caggtcaaggcccttctcaccgaggagatggagcaggcggtaaacctcagcgtgcccatg
gtggccgaggccaacgccggtaaaacctggtatgacgcaaaagggtaa
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