Hungateiclostridiaceae bacterium KB18: A4V00_15025
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Entry
A4V00_15025 CDS
T04437
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ruk
Hungateiclostridiaceae bacterium KB18
Pathway
ruk02020
Two-component system
ruk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ruk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A4V00_15025
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A4V00_15025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ruk03021
]
A4V00_15025
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ruk02035
]
A4V00_15025
Transcription machinery [BR:
ruk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4V00_15025
Bacterial motility proteins [BR:
ruk02035
]
Flagellar system
Flagellar assembly proteins
Stator
A4V00_15025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_37
MarR
Motif
Other DBs
NCBI-ProteinID:
ANU55219
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All DBs
Position
2974799..2975578
Genome browser
AA seq
259 aa
AA seq
DB search
MTAPLKDRGGGTTEELFALYRESGDQKLKWEIAMRYTGLIKSIALQIRGVFCSFTQLDDI
INEGLIVLAEAVDKFDPEKGRFEVYVAKRIRGMIVDLARRQDWVPRTVRQKAQRIERAAT
ELYNETGRYPSDEQIAEHLGMSMGDYQETLANSSLQSILSLQELFDSSDMWPSDPGTEEG
AQSSPEQRLMDEELTDTLAKAIGGMKENEQLVLSLYYEKNLKMKDIAAVMDITPPRVSQI
HARAVQKLKVLMESYLRGE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccccctaaaggatcgtggcggagggaccaccgaggagctgttcgctctttac
cgcgagagcggggaccagaagctgaaatgggagatagccatgcgctatacggggctgata
aagagcatagccctacagatacggggggtgttctgcagctttacccagctggacgacatc
atcaacgagggccttatcgtgctggccgaggccgtggacaaattcgacccggagaagggc
cggttcgaggtatatgtggcaaagcgcataaggggcatgatagtggaccttgcccggcgg
caggactgggtgccccgcacggtgcgccagaaggcccagaggatagagcgggccgccact
gagctgtataatgagacgggccgctaccccagcgacgagcagatagcggagcatctgggc
atgagtatgggggattatcaggagaccctggcaaactcctccttacagagcatactgtcg
ttgcaggagctgtttgacagcagcgatatgtggccctcggacccgggcacagaggaggga
gcacagagctccccggagcagaggctcatggacgaggagctgacggacaccctggcaaag
gccatcggcggcatgaaggagaacgagcagctggtgctgtcgctgtattatgagaagaac
ctaaagatgaaggacatcgcggcggtgatggatattacccccccaagggtgtcccaaata
cacgccagggccgtgcagaagctgaaggtgctgatggagagctaccttaggggcgagtga
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