Hungateiclostridiaceae bacterium KB18: A4V00_16885
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Entry
A4V00_16885 CDS
T04437
Name
(GenBank) integration host factor subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
ruk
Hungateiclostridiaceae bacterium KB18
Brite
KEGG Orthology (KO) [BR:
ruk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ruk03032
]
A4V00_16885
03036 Chromosome and associated proteins [BR:
ruk03036
]
A4V00_16885
03400 DNA repair and recombination proteins [BR:
ruk03400
]
A4V00_16885
DNA replication proteins [BR:
ruk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A4V00_16885
Chromosome and associated proteins [BR:
ruk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A4V00_16885
DNA repair and recombination proteins [BR:
ruk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A4V00_16885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ANU55548
UniProt:
A0A1C7GSN2
LinkDB
All DBs
Position
3376335..3376610
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELVAEVSEKAGLTKRDAEAAVKAIVDSVTEALAKGDKVQLVGFGTFEVREHAARTG
RNPRTGGTMEIPASKAPAFKAGQALKDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacagaattggttgcggaagtgtctgaaaaggcagggctgacaaagcgggat
gccgaggcagccgtaaaggcgatagtcgacagtgttactgaggctcttgcaaagggcgac
aaggtccagctggtgggctttggcacctttgaggtgcgcgagcacgccgcccgcaccggc
cgtaacccccgcacaggcggcaccatggagatccccgcctctaaggcccctgcttttaaa
gcgggccaggccctgaaggacgctgtgaacaagtga
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integrated database retrieval system
