Roseimaritima ulvae: UC8_03200
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Entry
UC8_03200 CDS
T06179
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rul
Roseimaritima ulvae
Pathway
rul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UC8_03200 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rul03019
]
UC8_03200 (deaD)
03009 Ribosome biogenesis [BR:
rul03009
]
UC8_03200 (deaD)
Enzymes [BR:
rul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UC8_03200 (deaD)
Messenger RNA biogenesis [BR:
rul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UC8_03200 (deaD)
Ribosome biogenesis [BR:
rul03009
]
Prokaryotic type
rRNA helicases
UC8_03200 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
Extensin_1
ResIII
HC2
AAA_30
P-loop_SecA
CMS1
ASFV_J13L
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEG38363
UniProt:
A0A5B9QWN8
LinkDB
All DBs
Position
complement(467988..470354)
Genome browser
AA seq
788 aa
AA seq
DB search
MSEENTHEQPNLDTAGNGLDTFEMSTTEIVTTPADSLLAQYADPISCDPPSLIVEPAVAE
ELGVVEQAVVEQPTAEEPVVEPPAAEQPVVEEAVTEQPIIEQPIIEQPVVEEVAVEQPAA
EQPVAEEVVAEQPITVEPVVEQPTVEQPVAAKAVAAKPVVEQPEAAKPVAEKTTEGTKEK
SSGEQTFRDLALLPEVQQAVAREGYDKPTDIQAQIIPYMLDGRDVLAQSQTGTGKTAAFA
LPILSRINVQQHAPQVLVLAPTRELAIQVAKSFATYGKDVRDFRTVAIYGGQDYEAQFRA
LRRGVQVVVGTPGRVIDHVNRGSLDLSQIQCLVLDEADEMLNMGFLEDVQFVLDKTPDER
QVALFSATLPGPIRSIAQRYLTDPAKITIKNKTMTADSIRQRAVFVTARDKMDVLTRILE
IDQTDGVIVFTKTREATVNVAEQLNRQGFSAVALNGDMPQKVRERTIAQLKSGQLDILVA
TDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRKGEAIIFLSKTQRGRLRMIE
RTTKQPIEIIQAPTTKEINLARVERFKQRITDVTADQDLSMFKQIIAEYAEETGKPMDMI
AAALAEIAQQGRPFMMKDQPKPKKREREDRNRGDYDNRPQRGGNRPGGRRLGPPAAGMTR
YRIEVGDRDGVSPGNIVGAIANEAGIQGNFIGPISIQDSFSTVDLPEGMPRDVYQTLRNT
WVSGKQLRIRYVAPEDGDQRPRRTNHQGTRPHHAKSGGHSSGGGHAKKSFSHGKPPFAGK
KKKRKNKA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagagaatacgcacgaacaacctaatctcgacaccgccggcaacggactcgac
accttcgaaatgtcgaccaccgaaatcgtgaccacgcccgccgactcgttgctagcccaa
tacgccgacccgatctcctgcgacccaccatcgttgatcgtcgaaccagccgtcgccgaa
gaacttggcgtcgttgagcaagctgtcgttgaacaacccactgctgaagaacctgtcgtc
gagccgcctgctgctgagcagcccgtcgttgaagaagctgtcaccgaacagcccatcatc
gaacaaccgatcatcgaacaacctgtcgtcgaagaagttgctgtcgagcaaccggccgct
gagcagcctgtcgctgaagaagttgtcgctgaacagcccattaccgtagaacctgtcgtc
gaacagcccaccgtcgaacagcctgtcgctgcaaaagctgtcgctgcaaaacctgtcgtc
gagcaacccgaagctgcaaaacctgtcgcagaaaagacaacggaaggaacgaaggaaaaa
tcgtcgggcgagcagacctttcgcgacttggcgctgctgccggaagtccaacaagcggtc
gcccgagaaggctacgacaaacccaccgacatccaagcccagatcattccgtacatgctc
gacggtcgcgacgtgttggctcaatcgcaaaccggcacggggaaaacggccgcttttgcc
ttgcccatcctctcccgcatcaacgtccaacaacacgctccgcaagtcctggtgctggcc
cccacgcgcgaactggcaattcaggtcgccaagtcctttgcgacttacggcaaagacgtt
cgcgacttccgcaccgtagcgatttacggtggccaagattacgaagctcaattccgtgcg
ctgcggcgcggcgttcaagtcgttgtcggcacgcccggtcgcgtgatcgatcacgtcaac
cgcggctcgttggacctgagccagattcaatgtttggtgctggacgaagccgacgagatg
ctcaacatgggcttcttggaagacgtgcaatttgtgctcgacaaaactcccgatgaacgg
caggtcgccctgttctcggcaacgctgcccggcccgattcgctccatcgctcagcgttat
ctgaccgatccggccaagatcacgatcaagaacaagacgatgacggccgattcgattcgg
cagcgggccgtgtttgtcaccgctcgtgacaaaatggatgtgctgactcggatcctggaa
atcgaccagaccgatggcgtgatcgtgtttaccaagacacgtgaagccacggtcaatgtc
gccgaacaactgaatcgtcaaggcttttcggccgtggccctcaacggcgacatgccgcaa
aaggtccgcgaacgcacgatcgctcaactcaagtccggtcagctggatatcttggtagcc
accgacgtcgccgcgcgcggtttggatgtgcctcgcatcagccacgtgtttaacttcgac
ctacctcacgacagcgaatcgtacgtccaccgcatcggccgcacaggccgggccggtcgc
aagggcgaagcgatcattttcctgtccaagacgcagcgtggccggttgcggatgatcgaa
cggacgaccaaacagccgatcgaaatcatccaggctcccaccaccaaagaaatcaacttg
gctcgcgttgaacgctttaaacaacgcatcaccgatgtgacggccgatcaagatctatcg
atgttcaaacagatcatcgccgagtacgccgaagaaaccggcaagccgatggatatgatc
gccgcggcgttggctgaaatcgctcaacaggggcggcccttcatgatgaaagaccaaccc
aagcccaagaagcgggaacgcgaggaccgcaatcgtggcgactacgacaatcggcctcag
cgcggcggcaatcgccccggtggacgtcgcctcggaccgcccgcagccggcatgacacgc
taccgcatcgaagtcggcgatcgtgacggtgttagccccggcaatattgtcggagcgatc
gccaacgaagccggcatccaaggcaacttcatcggcccgatttcgattcaggattcgttc
agcaccgtcgacctgcccgaaggcatgccccgcgacgtctaccagacgctccgcaacacc
tgggtcagtggcaagcaactgcggatccgctacgtcgctcctgaagatggcgaccagcga
ccgcgccgcaccaaccaccaaggcacccggccgcatcacgccaaaagcggcggccacagc
agcggtggtggacacgccaaaaaatcgttcagccacggcaaacccccgttcgccggcaaa
aagaaaaaacgcaagaacaaagcgtag
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integrated database retrieval system
