Roseimaritima ulvae: UC8_34000
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Entry
UC8_34000 CDS
T06179
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rul
Roseimaritima ulvae
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rul03032
]
UC8_34000 (topA)
03400 DNA repair and recombination proteins [BR:
rul03400
]
UC8_34000 (topA)
Enzymes [BR:
rul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UC8_34000 (topA)
DNA replication proteins [BR:
rul03032
]
Prokaryotic type
DNA Topoisomerases
UC8_34000 (topA)
DNA repair and recombination proteins [BR:
rul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UC8_34000 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Peptidase_C92
Motif
Other DBs
NCBI-ProteinID:
QEG41380
UniProt:
A0A5B9QUD7
LinkDB
All DBs
Position
complement(4683770..4686502)
Genome browser
AA seq
910 aa
AA seq
DB search
MVKSTGKALVIVESPAKARTISKFLGKNYQVEASIGHVRDLPGGKKDMPEKYKSEDWAYL
GVNVDEGFEPVYIVPDEKKKQVKKLRDALKEADELYLATDEDREGEAISWHLQELLKPKV
PVHRLVFHEITKEAIEAALASPRSIDDGLVDAQETRRILDRLYGYDVSQLLWRKIGRGLS
AGRVQSVAVRVIVERERERMAFHSATYWDLEAIFETGKPQSFPATLTHVGDRKIPSGKDF
DPDTGLLKNPQLLQMDQQAAEALAEKLQSADFAVASVENKPYTERPKAPFTTSTLQQEAN
RKLGLTARNAMRAAQKLYENGYITYMRTDSTMLSNEAVKAARELVQSEYGENFLHASVRT
YASKVKNAQEAHEAIRPAGTVFRKPESLRGELNKDEFRLYDLIWKRTVACQMADAKKRRT
TVVIKGGDATFQASGTSIEFEGFLRAYVEGSDDPEAELADKETLLPAVEQGEALSAKNLN
PKDHSTKPPARYSEAALTRILEEKGIGRPSTYASIIETIQARDYVYKKGGALVPSWTAFS
VVRLLETHFGALVDYEFTAQMEDFLDAISRKEAERLAYLKEFYFGEDQRGIGLKPKLTAK
IDEIDPRLTAMFSLGTPQSGEHREEVFVRVGKFGPFLEQGERRGSIPDGLPPDEMNLEKA
LELIESSSRDDEPLGNHEETGKPIYLKVGRFGPYVQLGENDDEEKKNKSIPKMVAPENVT
LELAHQLLALPRNLGEYAELEADIEANDGRYGPYIRCGKETRSLPAGMSPLEVTREQAIE
LLKQPKTRGRAAPKEPIKVFDDPSPVTENPVRLLEGRYGPYVTDGDTNASLPKGTVPEEL
TFNEALDLLAERAAKAPKKKKKAKKKTAKATKKKAAKKKAAKKKTAKKKTAKKKTAKAKK
ATKKGTVKKP
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatccactggcaaggcattggtgatcgtcgaatcgcccgccaaggcgcgaact
atctccaaattccttggaaagaactaccaggtggaagccagtattggccacgtccgcgat
ttgcccggtggtaaaaaggacatgcccgaaaagtataaatcggaagactgggcttacctg
ggggttaacgtcgacgagggcttcgaaccggtgtatatcgtgccggacgaaaaaaagaag
caggtcaagaaactcagagacgcgctgaaagaagccgacgagctgtatctggcgacggac
gaagaccgcgaaggggaagcgatcagctggcaccttcaggaattgttaaaacccaaagtg
ccggtccaccgtttggtgttccacgaaatcaccaaagaggccatcgaagccgctctggcc
tccccccgttcgatcgacgacggtctggtcgatgcccaggaaacccgccgcatcctcgac
cgcttgtacggttacgacgtgtcgcaactgttgtggcgaaagatcggtcgcggcttgtcc
gccggtcgcgtgcaaagtgtggccgtgcgggtgatcgtcgaacgcgaacgcgagcggatg
gcgtttcattcggccacctactgggacctggaagcgattttcgaaaccggtaagccgcaa
agttttccggcgacgctgacccacgtcggcgatcgcaaaattccctccggcaaagatttt
gatcccgacaccggcttgctgaaaaatccgcaactgctgcagatggaccagcaagcggct
gaagccttagcggaaaaactgcagtccgccgactttgccgtcgccagcgtcgaaaacaaa
ccctacaccgaacgccccaaagctccgtttaccaccagcacgttgcagcaggaggccaac
cgcaagctgggcctgacggctcgcaacgccatgcgggccgctcagaaactgtacgaaaac
ggttacatcacctacatgcgtaccgacagcacgatgctgtccaacgaagccgtcaaagcg
gctcgcgagttggtgcaaagcgaatacggcgagaacttcttgcacgcttcggtacgcacc
tacgccagcaaggtgaagaacgcccaggaggctcacgaagcgatccggccggccggcacc
gtgttccgcaaaccggaatcgctgcgaggcgaattgaacaaagacgaattccggctgtac
gacctgatctggaaacggaccgtcgcctgccagatggccgatgccaaaaaacgccgcacc
acggtggtcatcaaaggcggcgatgccacgttccaggccagtggaaccagcatcgaattc
gaaggtttcctgcgggcttacgttgaaggcagcgacgacccggaagccgaattggcggac
aaagaaaccctgctgccggcagtcgaacagggcgaagccttatcggctaagaatctgaac
cccaaagaccactccaccaaacctccggcgcggtacagcgaagccgctctgacgcggatc
ctggaagagaaaggcatcggccggcccagtacctacgcctcgattatcgaaaccatccag
gcccgcgactacgtctacaagaaaggcggggcgctggtgcccagttggacggcgtttagc
gtggtgcgactgctggaaacccacttcggcgccctggtcgattacgaattcaccgcccag
atggaagactttctggatgccatcagccgcaaagaagccgaacggctggcttatctgaaa
gagttctatttcggcgaagatcaacgcggcatcggcttgaagcccaagctgacggcgaag
atcgacgaaatcgatccgcggttgacggccatgttctcgctgggcacgccgcagtcgggc
gagcatcgcgaagaggtgtttgtacgcgtcggcaaattcggcccgtttttggaacagggc
gagcgacgaggcagcattcccgatggcttgccgcccgacgaaatgaatctggagaaagcg
ctggagctgatcgagtcgtcctctcgcgatgacgaaccgttgggcaaccatgaggaaacc
ggaaagccgatctatttgaaggtcgggcggttcgggccctatgtccaactgggcgaaaac
gacgacgaagagaaaaagaacaagtcgatccccaagatggtggcgccggaaaacgtcact
ctggaattggcgcatcaactgttggcattaccccgcaacctgggcgaatacgccgaactg
gaagccgacatcgaagccaatgacggacgctacggaccctacatccgctgcggcaaagaa
acccgttcgttgcccgccggcatgtcgccgttggaggtgacccgtgagcaagccatcgaa
ttgctcaaacaacccaaaacccgcggtcgggcggcacccaaagaaccgatcaaagtcttc
gacgacccgtcgccggtgaccgagaacccggtccgcttgttagagggacgctatgggccg
tatgtgaccgacggcgacaccaacgcctcgctgcccaagggaaccgtgcccgaagaattg
accttcaacgaggccttggatctgttggccgaacgggccgccaaggcgccgaagaaaaag
aagaaggccaagaagaagaccgccaaggcgaccaagaagaaagctgccaagaagaaagct
gccaagaagaagacggccaaaaagaaaaccgccaagaaaaaaacggcgaaagcgaaaaag
gcgaccaaaaaaggcaccgtcaagaagccctga
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