Roseimaritima ulvae: UC8_39420
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Entry
UC8_39420 CDS
T06179
Symbol
groL_2
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rul
Roseimaritima ulvae
Pathway
rul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UC8_39420 (groL_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rul03019
]
UC8_39420 (groL_2)
03110 Chaperones and folding catalysts [BR:
rul03110
]
UC8_39420 (groL_2)
03029 Mitochondrial biogenesis [BR:
rul03029
]
UC8_39420 (groL_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rul04147
]
UC8_39420 (groL_2)
Enzymes [BR:
rul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
UC8_39420 (groL_2)
Messenger RNA biogenesis [BR:
rul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UC8_39420 (groL_2)
Chaperones and folding catalysts [BR:
rul03110
]
Heat shock proteins
HSP60 / Chaperonin
UC8_39420 (groL_2)
Mitochondrial biogenesis [BR:
rul03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
UC8_39420 (groL_2)
Exosome [BR:
rul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UC8_39420 (groL_2)
Exosomal proteins of other body fluids (saliva and urine)
UC8_39420 (groL_2)
Exosomal proteins of breast cancer cells
UC8_39420 (groL_2)
Exosomal proteins of colorectal cancer cells
UC8_39420 (groL_2)
Exosomal proteins of bladder cancer cells
UC8_39420 (groL_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QEG41914
UniProt:
A0A5B9QSD9
LinkDB
All DBs
Position
complement(5441597..5443315)
Genome browser
AA seq
572 aa
AA seq
DB search
MAKQIVFDDDARGPLLAGVSKLARAVRSTLGPRGRNAVLDKGWGSPKVTKDGVTVAEDIE
LDDPFENLGAQLVKEAASKTNDVAGDGTTTATVLSEAIFREGLKAVASGADPMALGRGIA
KAVDVVSDQIAKLATPINEKSKSEIKQVATIAGNNDPTIGNVLADAFTKVGKNGVITVEE
GRGSETTVDVVEGMQFDRGFLSPHFVTNQDDVSVELDDCHILLFEEKISSNKKLIPLLEA
ASKSKKPLLIIAEDIEGEALATLVVNKMRGILSVAAVKAPGYGDRRKAIMGDIATLTGGQ
AIFKDLGIDLESVQLSDLGRAKKVRITSEATTMVGGAGKKADIEGRVEQIRREIDNTDSD
YDREKLQERLAKLAGGVAQISVGAATETEMKERKALIDDARAATQAALEEGIVPGGGVAL
IRCTAAVQKLEKTLEGDQLAGARIIRKVLDQPLRAIANNAGLEGAVVVNRVNQMKGKNDG
YDANADSYGDMLAAGIVDPAKVVRTSLTNAASVASLLLTTESLICDIPEEAEEGEGDHHH
DHGMGGMGGMGGGMGGMGGMGGMGGMDMGGMM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacagatcgtgttcgatgatgacgcacgtggccctctattggccggcgtgagc
aaattggcccgagcggtacgcagcactctggggcctcgcggccgcaacgccgtgctggac
aagggttggggatcccccaaagtaaccaaagacggtgtcaccgtcgccgaagatatcgag
ctggacgaccccttcgaaaatctcggggcgcagctggtcaaagaagcagccagcaaaacc
aacgatgtggctggtgacggcaccaccacggccaccgtgctcagcgaagccattttccgc
gaaggtttgaaggccgttgccagcggtgccgacccgatggccctgggccgcggcatcgcc
aaagccgtcgacgtggtcagtgatcagattgccaaactggcgacgccgatcaacgaaaag
tccaagtcggaaatcaagcaggttgctaccatcgctggtaacaatgatccgaccatcggc
aacgtgttggccgacgccttcaccaaggtcggtaagaacggtgtgatcacggtcgaagaa
ggtcgtggcagcgaaaccaccgtcgacgtcgtcgaaggcatgcagttcgatcgcggcttc
ctgtcgccgcacttcgtgaccaaccaagacgatgtctcggtcgaattggacgactgccac
atcttgttgttcgaagaaaagatcagcagcaacaagaagctgatcccgctgctggaagcc
gccagcaagtccaagaaacccttgttgatcatcgccgaagatatcgaaggcgaagccctg
gcgacgttggtcgtgaacaagatgcgtggcatcctgtcggtcgccgctgtcaaagctccc
ggttacggcgatcgccgcaaagccattatgggcgacatcgctaccttgaccggtggtcag
gccatcttcaaagacctgggcatcgatctggaaagcgtccagttgagcgatctgggacgc
gccaagaaagttcgtatcaccagcgaagcgaccaccatggtgggcggtgctggcaagaaa
gccgatatcgaaggacgcgtcgaacagatccgtcgcgaaatcgacaacaccgacagcgac
tacgatcgcgaaaagctgcaagaacgactggccaagctggccggcggagtggcccagatc
agcgttggtgcggccaccgaaaccgaaatgaaagagcgtaaggctctgatcgacgacgct
cgcgcggccacacaagcggccctcgaagaaggcatcgtccccggtggtggagtcgctttg
attcgttgcaccgctgcggtccagaaactggaaaagacgctcgaaggtgaccagttggcc
ggcgctcggatcatccgcaaagtgctggatcagccgttgcgtgcgatcgccaacaacgct
ggcttggaaggtgccgtggtcgttaaccgcgtcaaccaaatgaagggcaaaaacgacggc
tacgacgccaacgccgactcctacggcgacatgttggcagccgggatcgtcgatcctgcc
aaggtcgttcgcacctcgttgaccaacgctgccagtgtcgcatcgttgttgctgaccacc
gaatcgctgatctgcgacattcccgaagaagcggaagaaggcgaaggcgaccatcaccat
gaccacggtatgggtggcatgggcggaatgggcggcggcatgggaggtatgggcggcatg
ggaggcatgggcggcatggacatgggcggcatgatgtaa
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