Roseimaritima ulvae: UC8_39500
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Entry
UC8_39500 CDS
T06179
Symbol
lcfB_3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rul
Roseimaritima ulvae
Pathway
rul00061
Fatty acid biosynthesis
rul00071
Fatty acid degradation
rul01100
Metabolic pathways
rul01212
Fatty acid metabolism
rul02024
Quorum sensing
rul04146
Peroxisome
Module
rul_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
UC8_39500 (lcfB_3)
00071 Fatty acid degradation
UC8_39500 (lcfB_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
UC8_39500 (lcfB_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
UC8_39500 (lcfB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rul01004
]
UC8_39500 (lcfB_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rul04147
]
UC8_39500 (lcfB_3)
Enzymes [BR:
rul01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
UC8_39500 (lcfB_3)
Lipid biosynthesis proteins [BR:
rul01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
UC8_39500 (lcfB_3)
Exosome [BR:
rul04147
]
Exosomal proteins
Exosomal proteins of breast milk
UC8_39500 (lcfB_3)
Exosomal proteins of breast cancer cells
UC8_39500 (lcfB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QEG41922
UniProt:
A0A5B9QVD6
LinkDB
All DBs
Position
complement(5453773..5455554)
Genome browser
AA seq
593 aa
AA seq
DB search
MSQWFASNAAAVSQPQRIPDSLDAFHRYAMPGYALLDRAAQRVPTQVACRYYDQSWTYEG
LQHDVYRTARMFAALGIGRGDRVALLLPNVPEYIIALHAIWRRGAIAVAISPLMVPSEVH
ALLRAVDCHHVVTLDLLAHLLPGKEEGLEKALLVSLRERLPGYQQLGYFLSRLKRTGLWY
LPTGDQAEWFWEALDACKPLRGTPDIDPETTPAYILPTGGTTGEPKSVTLSHRNLVANAL
QQARVAGASMGEEKLMAVLPFFHSYGLSAVILGGAALGAELVLHHRFSTGHVLQLIEQHR
PTVMHAVPAMLAAMNTQLRGRSNRLDSLKWVISGGAPLPADTAAEFADHCGCLVVEGYGL
SEASPVTHSGPLDGTARYGTIGLPLPDTDCRIVDPKAGDTDVLPGDVGELIVRGPQVMLG
YWNDPQATAAVIRDGWLYTGDLARQDSAGFYQIVDRKKDLVITSGYNVYPREVEAVMRSC
PLIDDVAIVGQPDAERGEIVKAFVRLRTGRRWDQDALDAFCHTHLSAHKRPRAFEQVIGD
FPKNFLGKVLRRHLRAAPDSNGPSQPSQQPPATPVEPDPPAADSPSLEQEPTS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtggtttgcctccaatgcggcggctgtctcgcagccccagcggatccccgat
tcgcttgacgcgttccatcgctatgccatgcccggttacgcgttgttggatcgagccgcg
cagcgcgtgcccactcaggttgcttgtcgctactacgaccagagctggacgtacgaaggt
ttgcagcatgacgtctaccgcacggcgcggatgttcgcggcgctcggtatcggccgcggc
gaccgcgtggccttgttgctgcccaacgtgcccgagtacatcattgccttgcatgctatc
tggcggcgcggcgcgatcgctgtggctatcagtccgctgatggttcccagcgaagtccac
gcgctgctgcgcgccgtggattgccaccatgtggtcacgttagacctgctcgcccatcta
ttgcccggcaaggaagaaggcttagagaaagcgttgctggtttcgctgcgtgaacggctg
cccgggtatcaacagctaggctacttcctgtcgcgattaaaacgcacgggattgtggtat
ctgcccaccggagatcaggctgagtggttttgggaagcgctcgacgcctgcaaaccgctg
cgggggacgccggacatcgatccagaaacgacgcccgcctacatcctgccgaccggcggg
accacgggagaacccaagtcggtgacgctcagccaccgcaatctggtagccaacgcgctg
caacaggctcgcgtcgccggagcgtcaatgggcgaagaaaaattgatggccgtactgccc
ttcttccacagttacggtttgtcggctgtgattctgggcggcgcggccttgggagccgaa
ttggttctgcatcatcgcttcagcaccggtcatgtgctgcaattgatcgaacagcaccgg
cccacagtgatgcatgccgtgccggcgatgctggcggccatgaatacgcaactgcgagga
cggtccaaccgcctggattcactcaaatgggtgatctccggcggcgctcccttgccagcc
gacacggcggcggagttcgcggatcattgtgggtgtctggtcgttgaaggctacggtttg
tccgaagcctcaccggtcacgcacagcggccccctggatggcaccgcacgctacggcacg
atcggtttgccgctgcccgataccgactgccggatcgtcgatccgaaagctggcgatacc
gacgtgttgcccggcgacgtgggcgaattaatcgtccgcggaccgcaggtgatgttgggc
tactggaacgatccgcaggccaccgcggcggtgattcgcgatggttggttgtacaccggc
gacttggctcgacaggattccgccggcttctaccaaatcgtggatcgcaaaaaggacctg
gtgatcacctcggggtacaacgtctatccgcgcgaggtggaggcggtgatgcgttcctgc
cccttgatcgacgacgtagcgatcgtgggccagcccgatgccgaacgcggcgaaatcgtc
aaagccttcgtgcggctgcggaccggccggcgatgggatcaggacgccctcgatgcgttc
tgccacacgcacctttcggctcataaacgtccgcgcgcctttgaacaggtgatcggtgac
ttccccaaaaatttcctggggaaagttctacgccgtcaccttcgtgccgctcccgattcc
aacggcccatcgcagccatcgcagcagccgccggcgacgcccgtcgaacccgacccgccg
gccgctgattctccgtcgcttgaacaggagcccacctcatga
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