Roseimaritima ulvae: UC8_41950
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Entry
UC8_41950 CDS
T06179
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rul
Roseimaritima ulvae
Pathway
rul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UC8_41950 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rul03021
]
UC8_41950 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
rul03400
]
UC8_41950 (rpoA_1)
Enzymes [BR:
rul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UC8_41950 (rpoA_1)
Transcription machinery [BR:
rul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UC8_41950 (rpoA_1)
DNA repair and recombination proteins [BR:
rul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UC8_41950 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QEG42161
UniProt:
A0A5B9R6I3
LinkDB
All DBs
Position
complement(5787826..5788821)
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AA seq
331 aa
AA seq
DB search
MHIRWRGMELPSTVEVDAESLTETYGKFVAEPFERGFGTSVGNSLRRVLLSSLMGSAVTQ
IKIRGAQHEFTTIPGVLEDVTDIVLNVKSLVVKNNSEATRVITVEADKAGVITGADVQVD
ADVEIINKNHVLATLTDDVPFMMEMVVENGRGYVPSTEHSTGDHEIGIIPIDAVYSPITR
VRYEVEETRVGQKTNYDKLTLELWTDGSLNPEIALVEGAKILRKHLNPFVQYREVGPSIF
SASRGGAGSAEAQLDAKLNMTLADLKLSVRANNCLESEDVQTVRDLVQRNEDQLLEVRNF
GETTLNEVREKLAQYGLHLGMRVPNSSGMMP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcatattcgatggcgtggaatggaactgccgagtacggtcgaagtcgatgcggagtcg
ctgacggaaacctacggtaaattcgtcgccgaaccgttcgaacgcggcttcggtaccagc
gtgggcaacagcctgcgacgcgtgctgctgtccagcttgatgggcagtgccgtgacccaa
atcaaaatccgtggcgctcagcacgagttcacgaccattccgggcgtcttggaagacgtc
accgacatcgttctgaatgtcaaaagtctggttgtcaaaaacaatagcgaagcgactcgc
gtgatcaccgtggaagccgacaaggcgggcgtgatcaccggcgctgacgtgcaagtggat
gccgacgtcgagatcatcaacaagaatcacgtgcttgccacgttgaccgatgatgtcccc
ttcatgatggaaatggtggtggaaaacggtcgtggctacgtgccctcgaccgaacacagc
accggcgatcacgaaatcggcatcatccctatcgacgcggtgtacagccccatcacgcgg
gttcgctacgaagtcgaagagacgcgtgtcggtcagaagaccaactacgacaagctgact
ttggaactgtggaccgatggttcgctgaatcccgaaatcgccttggtcgaaggtgccaag
atccttcgcaaacacctcaaccccttcgtacagtatcgcgaagtcggacccagcatcttc
tccgcttcgcggggtggtgccggatcggccgaagcacagttggatgccaagctgaatatg
acgctggccgacctgaagctgtctgtgcgggccaacaactgcttggagtcggaagacgtt
caaacggttcgcgacctggtccaacgcaacgaagaccaattgttggaagtccgtaacttt
ggcgaaaccacgctgaacgaagtccgcgaaaaactggctcagtacggcttgcacctcggc
atgcgtgtgcccaacagcagcggcatgatgccctaa
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