Roseimaritima ulvae: UC8_42570
Help
Entry
UC8_42570 CDS
T06179
Symbol
groL_3
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rul
Roseimaritima ulvae
Pathway
rul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UC8_42570 (groL_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rul03019
]
UC8_42570 (groL_3)
03110 Chaperones and folding catalysts [BR:
rul03110
]
UC8_42570 (groL_3)
03029 Mitochondrial biogenesis [BR:
rul03029
]
UC8_42570 (groL_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rul04147
]
UC8_42570 (groL_3)
Enzymes [BR:
rul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
UC8_42570 (groL_3)
Messenger RNA biogenesis [BR:
rul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UC8_42570 (groL_3)
Chaperones and folding catalysts [BR:
rul03110
]
Heat shock proteins
HSP60 / Chaperonin
UC8_42570 (groL_3)
Mitochondrial biogenesis [BR:
rul03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
UC8_42570 (groL_3)
Exosome [BR:
rul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UC8_42570 (groL_3)
Exosomal proteins of other body fluids (saliva and urine)
UC8_42570 (groL_3)
Exosomal proteins of breast cancer cells
UC8_42570 (groL_3)
Exosomal proteins of colorectal cancer cells
UC8_42570 (groL_3)
Exosomal proteins of bladder cancer cells
UC8_42570 (groL_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QEG42223
UniProt:
A0A5B9R736
LinkDB
All DBs
Position
complement(5869571..5871187)
Genome browser
AA seq
538 aa
AA seq
DB search
MAKIIAFDQEAREAIRRGVNQLARAVKVTLGPKGRNVILQKSFGSPTVTKDGVTVAKEID
LEDVYENMGARMVREVASKTSDVAGDGTTTATVMAEAIFNEGLKAVVAGVNPIQMKNGIE
RAVSDLTDKLHSMATKVKDKDAMANVASIASNNDREIGELLADAMEKVGKDGVITVDEGK
SLKTEQEWVEGMQFDRGYLSPYFVTDATSMEAVLEDAYVLVFEKKISNIKDLVPLLEQVV
QQGKPLLIIAEDVDGEALATLVINRLRGTFTCVAVKAPGYGDRRKAMMEDIAILTGGQAI
FEALGTKLESVGLADLGRAKKIIIDKDNTTVIEGGGKKADIKARIDQIRREIDNSSSDYD
REKLEERLAKLAGGVAKVNVGAATESEMKEKKARVEDALHATRAAVEEGILPGGGVALLR
ASAGVKPGEELSDDEAVGYNIVLRACRAPVTMISENAGQDGGVVCEKVLSMKNNEGYNAL
TDTYEDLVKAGVIDPTKVTRTALANAASVATLLLTSDALVADAPKKGKGGHGGDHDMY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcattgcttttgatcaggaagcccgcgaagcgattcgccgcggcgtcaat
cagttggcacgtgcggttaaggtcacgctgggtcctaaaggccgcaacgtgatcctgcag
aagagcttcggcagccctacggtgaccaaggacggagtgacggtagcaaaagaaatcgac
ctggaagacgtctatgaaaacatgggcgcccggatggttcgcgaagtcgccagcaagacc
agcgacgtggccggtgacggcaccacgaccgcgaccgtgatggccgaagccatcttcaat
gagggcttgaaagccgttgtcgccggcgtcaatccgatccagatgaaaaacggcatcgaa
cgtgccgtcagcgatctgaccgacaagctgcattcgatggccaccaaggtcaaagacaaa
gacgccatggctaacgtggcctcgatcgccagcaacaacgaccgtgaaatcggcgaattg
ctggccgacgcgatggaaaaggtcggaaaagacggcgtgatcaccgtcgacgaaggcaaa
agcctgaagaccgagcaggagtgggtcgaaggcatgcagttcgaccgcggctacctgtcg
ccctacttcgtcaccgatgccaccagcatggaagccgtcctggaagacgcctacgtgttg
gtcttcgaaaagaaaatcagcaacatcaaggacctcgttccgctgctggaacaagttgtt
caacagggcaaaccgctgttgatcatcgccgaagatgtggacggcgaagccctggcgacg
ctggtcatcaaccgcctccgcgggaccttcacctgcgtggctgtcaaagctccaggctac
ggcgaccgtcgcaaagccatgatggaagacattgccatcctgaccggcggacaagccatc
ttcgaagctctgggcaccaagctggaaagcgtcggcctggccgatctgggacgcgccaag
aagatcatcatcgacaaggataacaccacggtcatcgaaggcggtggcaagaaagccgat
atcaaggctcggatcgatcagatccgccgcgaaatcgacaacagcagcagcgactatgat
cgcgaaaagctggaagaacgcttggccaaactggccggtggtgtcgccaaggtcaacgtg
ggtgcggccaccgagtcggaaatgaaagaaaagaaggctcgcgtcgaagacgccctgcac
gccacccgtgcagccgtcgaagaaggcatcctgcccggcggcggtgtggcactgctgcgt
gccagcgctggtgtcaaacccggcgaagagctgagcgatgacgaagcggtcggttacaac
atcgtccttcgcgcctgccgcgctccagtcaccatgatcagcgaaaacgctggccaagac
ggtggcgtggtctgcgaaaaagttctctccatgaagaacaacgaaggctacaacgcgctg
accgacacctacgaagacctggtcaaggccggcgtcatcgaccccaccaaggtcacgcgt
accgctctggccaacgccgccagcgtggccacgctgctgctgaccagcgacgccctggtc
gccgacgcccccaagaagggcaaaggcggacacggcggcgaccacgacatgtactag
DBGET
integrated database retrieval system
