Roseimaritima ulvae: UC8_44120
Help
Entry
UC8_44120 CDS
T06179
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rul
Roseimaritima ulvae
Pathway
rul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UC8_44120 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rul03021
]
UC8_44120 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
rul03400
]
UC8_44120 (rpoA_2)
Enzymes [BR:
rul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UC8_44120 (rpoA_2)
Transcription machinery [BR:
rul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UC8_44120 (rpoA_2)
DNA repair and recombination proteins [BR:
rul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UC8_44120 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_1
TPR_16
TPR_19
TPR_12
TPR_14
TPR_17
TPR_6
TPR_8
TPR_11
ANAPC3
TPR_7
TPR_10
TPR_CcmH_CycH
PknG_TPR
HAT_PRP39_C
ARC6
MIT
SAM_EPH
Sarcoglycan_2
ARM_TT21_N
Suf
Motif
Other DBs
NCBI-ProteinID:
QEG42378
UniProt:
A0A5B9QTN6
LinkDB
All DBs
Position
complement(6100711..6102036)
Genome browser
AA seq
441 aa
AA seq
DB search
MADAEVLDLKDVVLANTSFGPQEIANIRSAIASDFVHFGELRDAVGQMEQDTDRSPATQT
KLGVCQLLLGKFQKSRETLNSSDGGALAQFYLGRCAFELGEYDEAIKQYEAAQKAGYSED
DCKLAIAETKRYQRDLDGSMRILDDMFGPIEQTAEYQYQRAATVAAIGDKMPEAINHYER
ALQIDESHAGALFGLALENDRHGNDDEAVALYERAAAAFPTGVGVLINLGTIYEDRNQFD
RAQVCYRRILECYPDHPRATLYMKDASALGNVLYDEETQRRNDRLAQVLNLPVANFELSV
RSRNCLQKMGVETLGDLTRTSEGELLASKNFGETSLYEIREMLTSKGLSLGQFAHEKKAP
DPPIDTSHMSPDEQALLDRPISDLNLSVRARKCMVRLGLNTIGELVRKTGDEMLECKNFG
VTSLTEVREKLTDLGLKLRGD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgccgaagttctcgatttaaaagatgttgtactcgcgaacacctcttttggt
ccgcaggagatcgccaacatccgctcggccatcgcttcggacttcgtccatttcggcgag
ctgcgcgatgccgttggacagatggagcaggacaccgaccgcagtccggccacgcagacc
aaactaggtgtctgccagctgctgctgggcaagttccaaaagtcccgcgaaacgctgaac
agctccgatggtggagccctcgcacagttctacctgggccgctgtgcgttcgagctgggc
gagtacgacgaagccatcaaacagtacgaagccgctcagaaagccggctacagcgaagac
gattgcaagctggcgatcgccgaaaccaagcgttaccagcgtgacctggacgggtcgatg
cggattctggacgacatgtttggacccatcgaacagacggccgaataccagtaccagcgt
gctgccacggtggctgcgatcggcgacaaaatgcccgaagccatcaaccactacgaacgc
gcgctgcagatcgatgaatcgcacgccggtgcgttgtttggtttggcgttggaaaacgat
cggcacggcaacgatgacgaagcggtggctttgtatgaacgtgccgccgcggccttcccc
accggcgtcggcgtgctgatcaacttgggcaccatctacgaagatcgcaatcagttcgat
cgcgcccaggtttgctaccgccgtatcctggagtgctatccggatcatccgcgtgccacg
ttgtacatgaaagacgcttcggcgctgggcaacgtgctgtacgacgaagagacccagcgt
cgcaatgatcgcttggctcaggtcctgaacctgccggttgccaactttgaattgtccgtc
cgctctcgcaattgtctgcagaagatgggcgtcgaaaccctgggcgatctgactcgcacc
tccgaaggcgagctgctggccagcaagaactttggcgaaaccagcttgtacgaaatccgt
gagatgctgaccagcaaaggcctctcgctgggacagttcgctcacgaaaagaaggctccg
gatccacccatcgacacctcgcacatgtcgcccgacgagcaagctctgctcgatcgtccg
atctcggacctgaatctttcggtgcgagctcgcaagtgcatggtccgtttggggctgaac
acgatcggcgaattggtccgcaagaccggcgacgaaatgctggagtgcaaaaactttggc
gtcaccagtctgaccgaagtccgcgaaaagctgaccgacttgggactcaagcttcgcggt
gactga
DBGET
integrated database retrieval system
