Roseimaritima ulvae: UC8_45990
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Entry
UC8_45990 CDS
T06179
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rul
Roseimaritima ulvae
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rul03019
]
UC8_45990 (yhaM)
Messenger RNA biogenesis [BR:
rul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UC8_45990 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QEG42559
UniProt:
A0A5B9QXE8
LinkDB
All DBs
Position
6365508..6366470
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AA seq
320 aa
AA seq
DB search
MARRFVNELTEQETLDETYRAADKQLRANRQGGKYILMKLADRTGTMTAMLWNADDKLFD
SFERGDYIRCVGRTQLYNGNLQAILTEVRKVDVAEIDLADFDRFDSARADSLETQLRSVL
GGLTNVHLRRVGEAFLADDAFMSRLKIAPAAVTNHHAYPGGLLQHTLDLIDLAAAIAPKY
PNVDFELVIMGAFLHDLGKIEELSAEGEATYTDRGQLVGHIVIGVQMLGEKIAAAEEKSG
EAIPDTLRWQLEHLILSHHGQLEYGSPKVPMSLEAITLHHLDNLDAKLAAATSLIDTDVS
SDPHWTNYNPSMGRKFWKPS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgtttcgttaacgaattgaccgaacaagaaacgctcgacgaaacctatcga
gcggcggataaacagctgcgggccaatcgccagggtggcaagtacatcctgatgaagctg
gccgaccgcaccggcacgatgaccgccatgctgtggaacgccgacgacaagctctttgat
tccttcgaacgcggcgactacatccgctgcgtgggccgcacgcaactgtacaacggcaac
ctccaagcgatcctgaccgaagtccgcaaagtcgacgtggcagagatcgacctggctgac
ttcgatcgctttgactccgcccgcgccgattcgctggagacgcaactgcgcagcgtgctg
ggcggcttgacgaacgtccacctgcggcgtgtgggcgaagccttcctcgccgatgacgct
tttatgtcgcgtctgaaaatcgctcccgccgccgtcaccaaccaccacgcctaccctggc
ggcctcttgcagcacaccctggacctgatcgatctggcggcggccatcgcgcccaaatac
cccaacgtcgatttcgaactggtcatcatgggggctttcctgcacgacctgggcaaaatc
gaagagctttcggctgagggcgaagccacctacaccgaccgcggccagttggtcggccac
atcgtgatcggcgtccaaatgctgggggaaaaaatcgcggcggccgaagagaaatccggc
gaggcgatccccgatacgctgcggtggcagctggaacacttgatcctcagccatcatggc
cagctggaatacggcagccccaaggtgccgatgagcctggaagcgatcaccctccatcac
ttggacaacctggatgccaagctggccgccgccacctcgctgatcgacaccgacgtctcc
agcgacccacactggaccaactacaacccttcgatgggccgcaaattctggaaaccctcc
taa
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