Roseimaritima ulvae: UC8_48480
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Entry
UC8_48480 CDS
T06179
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rul
Roseimaritima ulvae
Pathway
rul03420
Nucleotide excision repair
rul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UC8_48480 (pcrA_2)
03430 Mismatch repair
UC8_48480 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rul03400
]
UC8_48480 (pcrA_2)
Enzymes [BR:
rul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UC8_48480 (pcrA_2)
DNA repair and recombination proteins [BR:
rul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UC8_48480 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
UC8_48480 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEG42806
UniProt:
A0A5B9R062
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All DBs
Position
6688616..6691003
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AA seq
795 aa
AA seq
DB search
MRKMTCTDVEQANPGYPQTPVLVDMSEQLTEAQQEAVEHIDGPMLILAGPGSGKTRVVTH
RIANLLQHGIAPHRIAALTFTNKAADEMRIRLGTLAPGQDVWMGTFHRFCARLLRRYAPL
VGLQENYSIYDTADSKQAMKRAVTAANVSTSHTSPEQIAAVISRAKNRLVGPEMMQGQSL
RANETVAARVYPVYQQQLLTANAVDFDDLLFHIARLLRESPELRAELDQRYQYIMVDEYQ
DTNLAQYAIVRSLSIDYPNLAVTGDPDQSIYGWRGADLNNILDFEKDYPHVKTVRLEKNY
RSTPNILRAADQLIRHNTRRKNKQLLTDREEGAAVVLRMYEDGYREADDIADQITAAIAM
EDCRPRDFAVFCRMNALTRSLEHAFRSRSLPYQIVNGVEFYQRKEIKDLLAYLHLINNPA
HDVALLRVINVPTRGIGAKTIERLRDFADSHRLPLLEAARRVDQIDTLPARSATKVRQFV
EMFDRLSIKATAALEDLVLYLLEETGYRKYLEKSSVDEQDNSPLANVDEFVTATVEFDRQ
HPDDGSLEAFLEQVALVSDTDAWEESNDRVTLMTMHAAKGLEFPRVFIIAVEDDLLPHYR
CKEDPMQVEEERRLLFVGITRAEQQLQLSYCKRRAMRGEMRPVVGSPFLMELPREEMRSV
EPDDSNQFFDAPDEFAYPDSWDLPAVDANDDHDELCQLPPEEQMPEKPAKSDKALPAALT
TAAKLLDNQDQTQKVPLSAFKQGMVVTHAEYGGGRIATLTGRGPKCTATVEFFNGTQRSF
RLAFAKLVPGDQDLD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaatgacatgcacggatgtcgagcaggcaaatccgggctatccccagacccca
gtgttggtagatatgagcgagcaattaaccgaagctcaacaagaggcggtcgagcatatc
gatggtccgatgttgattttggccggcccgggcagcggcaaaacccgcgtggtgacccat
cggatcgccaatttattgcagcacggcatcgctccgcatcgcatcgccgccttgacgttc
accaacaaggcggccgacgagatgcggattcgactcggcacgctggcgcccgggcaagac
gtttggatgggcacgttccaccgcttttgcgcccgcctgctgcggcgttacgcgccgctg
gtcggcttgcaagagaactattcgatttacgatacggcggatagtaaacaagccatgaag
cgggccgtgacggcggccaacgtttccacatcgcatacctcgcccgaacaaattgccgcc
gtgatcagccgcgccaaaaaccgactggtcggtccggagatgatgcagggccaatcgctg
cgagccaacgaaacggtcgccgcgcgggtctatccggtctaccagcagcagttgctgacg
gccaacgccgtcgatttcgacgacctcctgtttcacatcgctcgactgctacgagaatcg
cccgaactgcgggcggagctggatcagcggtatcagtacatcatggtggacgagtaccag
gacaccaacctcgcccaatacgccatcgtccgctcgctgtcgatcgactatcccaacctg
gccgtgacgggcgacccggatcaatcgatttacggttggcgaggcgcggacttgaacaac
atcctggactttgaaaaggattacccgcacgtcaaaacggtgcggctggaaaaaaactac
cgcagcacgcccaacatcctgcgcgctgcggaccaactgatccgtcacaatacgcggcgg
aaaaacaaacagttgttgaccgatcgtgaagaaggcgccgcggtcgtcctgcgaatgtac
gaggacggctatcgcgaagcggacgacatcgccgaccagatcaccgcggcgattgccatg
gaggattgtcggcctcgcgactttgcggtgttctgccgcatgaacgccctcacacgctcg
ctggaacacgccttccgctcacgcagcttgccctaccagatcgtcaacggcgtggagttt
tatcaacgcaaagaaatcaaagacctgttggcctacctgcacctgatcaacaaccccgcg
cacgacgtggccctgctgcgagtgatcaacgtgccgactcgagggatcggcgccaaaacc
atcgagcggttaagagacttcgccgacagccaccgcttgcccctgctcgaagcggctcgt
cgtgtcgaccagatcgacacgctcccggctcgttcggccactaaagtgcgccagtttgtg
gagatgtttgatcgcctgagcatcaaagccaccgcggccttggaagacctggtgttgtac
ctgctggaagagacggggtaccgcaagtatctggagaagagttcggtcgacgaacaggac
aacagcccgctggctaacgttgatgagtttgtcacggcgacggtggagtttgaccggcaa
catcccgacgacggttcgctggaagccttcctggaacaggtcgccctggtgtccgacacc
gacgcgtgggaagaatccaacgaccgtgtgaccttgatgacgatgcacgccgccaaaggc
ttggaattcccgcgggtgtttatcatcgccgtcgaagacgacctgctgccgcactaccgc
tgcaaagaagatcccatgcaggtggaggaagaacgacgattgttgtttgtgggcatcacc
cgagctgaacaacagttgcagctgagttactgtaaacgtcgtgccatgcggggtgagatg
cggcctgtggtgggcagtccgtttctgatggaattgccacgcgaagaaatgcgttcggtc
gagccggatgattccaatcagttcttcgacgccccggatgaattcgcttaccccgacagc
tgggatctaccggccgtcgatgccaacgacgaccacgacgagctgtgccagttgccgccc
gaagaacaaatgccggagaagcccgccaagtcggacaaggcccttccggcagccttgacc
acggccgccaaactgctggacaaccaagaccaaacccaaaaggtgccgctgtcggccttt
aagcaggggatggtggtgacgcacgccgagtatggcggcgggcggatcgctacgctgacc
ggtcgcggccccaagtgcaccgccacggtggaatttttcaacggcacgcagcggtccttc
cgcttggcgtttgccaagttggtgcccggcgaccaagacctggattaa
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