Ruminococcus sp. SR1/5: CK1_00650
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Entry
CK1_00650 CDS
T02601
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK1_00650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rum03019
]
CK1_00650
03110 Chaperones and folding catalysts [BR:
rum03110
]
CK1_00650
03029 Mitochondrial biogenesis [BR:
rum03029
]
CK1_00650
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rum04147
]
CK1_00650
Enzymes [BR:
rum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CK1_00650
Messenger RNA biogenesis [BR:
rum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CK1_00650
Chaperones and folding catalysts [BR:
rum03110
]
Heat shock proteins
HSP60 / Chaperonin
CK1_00650
Mitochondrial biogenesis [BR:
rum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CK1_00650
Exosome [BR:
rum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CK1_00650
Exosomal proteins of other body fluids (saliva and urine)
CK1_00650
Exosomal proteins of breast cancer cells
CK1_00650
Exosomal proteins of colorectal cancer cells
CK1_00650
Exosomal proteins of bladder cancer cells
CK1_00650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HAD_2
Motif
Other DBs
NCBI-ProteinID:
CBL18452
LinkDB
All DBs
Position
42255..43874
Genome browser
AA seq
539 aa
AA seq
DB search
MAKEIKYGAEARAALEAGVNKLADTVRVTLGPKGRNVVLDKSFGAPLITNDGVSIAKEIE
LEDGFENMGAQIIKEVASKTNDVAGDGTTTATVLAQAMVHEGMKNLAAGANPIILRKGMK
KATDVAVEAIKNMSQAINGKAQIANVAAISASDEQVGQLVADAMEKVSKDGVITVEESKT
MHTELDLVEGMQFDRGYISAYMSTDMEKMEATLDDPYILITDKKISNIQEILPLLEQVVQ
AGAKLLIIAEDVEGEALTTLIVNKLRGTFQVVAVKAPGYGDRRKEMLQDIAILTGGQVIS
DELGLDLKEAKMEQLGRAKSVKVAKENTVIVDGLGDKDAIAKRVAQIRAQIEETKSEFDK
EKLQERLAKLAGGVAVIRVGAATETEMKEAKLRLEDALAATRAAVEEGIIAGGGSAYIHA
SKEVAKLAATLEGDEKTGAYVILKALEAPLFHIAANAGLEGAVIINKVRESEVGTGFDAL
NEKYVNMVENGILDPAKVTRSALQNATSVASTLLTTEAVVSTIKEDTPAPATNPGMGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagatcaaatacggcgcagaagcaagagcagcacttgaagctggtgtaaat
aaacttgcagatacagtaagagtaacacttggaccgaaaggaagaaatgtagtacttgac
aaatctttcggtgctccgcttatcacaaacgatggtgtttccattgcaaaagagatcgag
cttgaggacggattcgagaatatgggtgctcagatcatcaaagaggttgcatccaagaca
aacgatgtagctggtgatggtactacaacagcaaccgtacttgcacaggcaatggtacat
gagggaatgaagaacctggcagcaggagcgaacccgatcatcctcagaaaaggaatgaaa
aaagcaacagatgttgcagtagaagcgatcaagaacatgagccaggcaattaacggaaaa
gctcagatcgctaatgtagccgcaatctctgcaagtgatgagcaggttggacagctggtt
gcagacgctatggagaaggtttccaaggatggtgttatcactgttgaggagtccaagacc
atgcatacagagcttgaccttgttgaaggtatgcagtttgaccgtggatatatttccgca
tacatgtctacagatatggagaagatggaggcaactcttgatgatccgtatattctgatc
acagataagaaaatcagcaacatccaggagatccttccgcttcttgagcaggttgttcag
gctggtgcaaagcttctcattattgcagaagatgttgagggtgaggctctcacaaccctg
atcgttaacaaactgagaggaaccttccaggtagtagctgttaaagcacctggctatggt
gacagaagaaaagagatgcttcaggatattgcgatcctgacaggcggacaggtgatctct
gacgagctcggtcttgatctgaaggaagctaaaatggagcagctcggacgtgcaaaatcc
gttaaggttgcaaaagagaatacagttatcgttgacggccttggcgataaagatgccatc
gcaaaacgtgttgctcagatccgtgcgcagatcgaggagacaaaatccgagtttgataaa
gaaaaacttcaggaaagacttgcaaaactggcaggcggcgtagctgttatccgtgtaggt
gctgctactgagacagagatgaaagaagcaaagcttcgtcttgaggatgctcttgcagca
acaagagcagctgttgaggaaggtatcatcgcaggcggcggctctgcttatatccatgct
tccaaagaggttgcaaagcttgcagcaacacttgagggagatgagaagacaggtgcttat
gtgatcctgaaagcccttgaggctccgttgttccacattgctgcaaacgcaggactggaa
ggcgctgttatcatcaacaaggtaagagagtctgaggtaggtacaggctttgatgctctg
aatgagaaatatgtaaacatggttgagaatggaatccttgatcctgcaaaggttacaaga
agtgcacttcagaacgcaacaagtgttgcatctacacttcttacaacagaggctgtagtt
tctacgatcaaagaggatactcctgctccggcaacaaacccgggaatgggaatgatgtaa
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