Ruminococcus sp. SR1/5: CK1_01350
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Entry
CK1_01350 CDS
T02601
Name
(GenBank) ABC-type sugar transport system, periplasmic component
KO
K10439
ribose transport system substrate-binding protein
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CK1_01350
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CK1_01350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rum02000
]
CK1_01350
Transporters [BR:
rum02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CK1_01350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ABC_sub_bind
PrpR_N
UPF0154
Baculo_LEF-2
HTH_12
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
CBL18509
LinkDB
All DBs
Position
111810..112757
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AA seq
315 aa
AA seq
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MRKKYICILVAVIGVCSLSGCGSSAKKTEEEQVTIGVVTKSKSSEYWLSVCDGMKDAAEK
YHADVVILSPDSETEEEVQKNMIRDLLKTDIQAMAVSPIDSYECEDYLNFAREKGISVYA
CDTPIEDSEIPYIGIDNEKLGYELGEQLAKALDHKGKIGVIAGDFKQAGHRMRVAGFEKY
MEKEPGITIEMVRNGYSNMRVSQKDVDEILVKYPDLNGIMATSAVTALGLSEATEGREIS
IVSVDAQEDALKAVQDGRIVALGAQSGYQIGYETIRYIVKDLEGEGTGEDEILDSQVLTE
ENIDTYMKDDGHSHP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaagtatatctgtattctggtggcagtcataggagtttgcagcctttccgga
tgcgggtcttctgcaaagaaaacagaagaagagcaggtaacgatcggtgttgttacaaaa
tctaaaagcagtgaatattggttgtctgtctgcgacggaatgaaagatgcggcagaaaaa
tatcatgcagatgtggtgattctgtctccggattccgaaacagaagaagaggttcagaaa
aatatgatccgggatcttctgaaaaccgatatccaggcgatggcagtttctcctatagat
tcctatgaatgcgaagattatttaaatttcgcaagagaaaaggggatttctgtatatgcc
tgtgatactcccatagaggattcagaaatcccttatattggaattgacaatgaaaaacta
ggctatgagctgggcgagcagcttgcaaaggctctggatcataaaggaaagattggcgtg
atcgccggtgattttaagcaggctggacaccggatgcgtgttgccggatttgaaaaatat
atggaaaaagagccagggatcaccattgaaatggttcggaacggatacagcaatatgcgg
gtttcccagaaggatgtggatgagatcctggtgaagtatccggatcttaacggaatcatg
gccacaagtgcagtgacggccctggggctttcagaggcaactgaaggacgggagatttct
attgtttccgtagatgctcaggaagatgccttgaaagcggttcaggatgggcgtattgtg
gcgcttggcgcgcagtccggttatcagatcggttatgaaaccatccggtatattgtgaag
gatctggagggagagggaacaggagaagatgagattctggattcccaggtgcttaccgaa
gaaaatattgatacatatatgaaggatgacggacattctcatccctga
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