Ruminococcus sp. SR1/5: CK1_01440
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Entry
CK1_01440 CDS
T02601
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rum03009
]
CK1_01440
Enzymes [BR:
rum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CK1_01440
Ribosome biogenesis [BR:
rum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CK1_01440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_25
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
N6_N4_Mtase
PCMT
Methyltransf_4
UPF0020
Methyltransf_11
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
CBL18517
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Position
122810..123982
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AA seq
390 aa
AA seq
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MEQKETVCSVAKKCGGCRYQGVSYQEQLRRKQRITEGLLKKFGKVEPIIGMEDPYYYRNK
VHAAFGRDRKGNVISGIYEEKSHRIVSVDDCMIEDKKSQEIIRTIRGMLKSFKIKTYDED
TGYGLLRHVLVRRGFSTGEIMVVLVTVSPIFPSKNNFVKALRKEYPEITTVVLNVNDRQT
SMVLGDRNIVLYGPGFIKDRLMGLTFRISPSSFYQVNPVQTEVLYGKAMEFAAMTGKERV
IDAYCGTGTIGIIASGNARDVIGVELNRDAIRDARMNARENKIRNVRFVPGDAGWFMEGM
AAEGEKVEVVLMDPPRSGSDRKFLHSLLTLSPEKIVYVSCNPETLARDLACLTKRDYLVK
KMQPVDMFPLTDSVEVVCLLENRRTRPGRA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaagagactgtctgttcagttgcgaagaaatgcggcggttgccgttatcag
ggtgtatcctaccaggagcagcttcgcaggaaacagagaattacagaaggccttctgaaa
aaattcggaaaagtagagccgatcattggaatggaagacccctattattacagaaacaaa
gttcatgcagcttttggccgtgaccggaagggaaacgtaatttccgggatttatgaggag
aagagtcataggatcgtttccgtagatgactgtatgatcgaagataaaaaaagtcaggag
atcatccgtaccatacgtggtatgctgaaatcctttaagatcaagacctatgatgaggat
acaggatatggacttctccgccatgtgcttgtgcggagaggcttttccacaggagagatc
atggtggtattagttacggtttctccaatatttccatctaagaataactttgtaaaagct
ctccgtaaagagtacccggagatcactacggtggttctcaatgtcaatgacagacagaca
agcatggtacttggagaccgcaatatcgtactttacggaccgggattcatcaaagatcga
cttatgggactgaccttccgtatttctccatcttctttttatcaggtaaatcctgtgcag
acagaagtactttacggaaaggctatggagtttgcggcaatgacaggaaaagagagggtg
atcgatgcttactgcggcacaggtactatcgggatcatcgcttccgggaatgccagggat
gtcattggtgtagaactgaaccgtgatgctatccgtgatgccagaatgaatgctagggaa
aacaagatccgtaatgttcgttttgttccgggagatgcaggatggtttatggaaggaatg
gcagcagagggagagaaggtggaggttgttctcatggatccgccacgttccggaagtgac
cgtaaattccttcactcccttttgactctttcaccggaaaaaattgtttatgtatcctgc
aacccggaaaccctagcaagagatcttgcctgccttactaagagagattacctggtaaag
aagatgcagccggttgatatgttcccgctcaccgattcagtggaggttgtttgccttctg
gagaatcgtaggaccagaccgggaagagcttag
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