Ruminococcus sp. SR1/5: CK1_03530
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Entry
CK1_03530 CDS
T02601
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
CK1_03530
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Gene cluster
GFIT
Motif
Pfam:
Recombinase
Resolvase
Zn_ribbon_recom
Sigma70_r4_2
HTH_38
DUF4368
Atg11_middle
Motif
Other DBs
NCBI-ProteinID:
CBL18686
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Position
295244..296935
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AA seq
563 aa
AA seq
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MARKSRKNIPEVVSSATVQTEVSRPFRAGLYARISMETEETLERGTIETQVELMKNFVAD
TEDIAVAEIYKDSDYSGTNFDRPGFTQMMEDIKHGKINCVIVKDLSRLGRNYVETSNYIE
RVFPFFHVRFLAVTDDFDSFREGVDLTVPLKNIINEFYSKDLAKKSSSAKKALWKEGKFT
GAWEPYGYRKSEQDRHQLVVDEEAAVHLREIFTMYMDGCSYSDIAKRLNTDGILSPTLQR
EYYKTGEKPSPESKPWNNYEVKRVLQDVHCTGDSVYGKYQQSVFQGNKQRNLPESEWLYA
ENTHEGIIDKELFRQVQEKIREFTEAYKKKHQLNNGAIRNHNFYTGKIRCGGCGNRMVLS
REKTGTFYYICGADANHKSGGNQCKGHRVKKEYVDEDVLRLIQSHMKAVLDTEKLIREMN
SASRNQTQYLLLDKEVGKLRRELSRISKRKSDLYEDYSERLITEEEYMQFSRIYSNEIEN
IKNRLDVVLAAQVRYSKDYHIEEGWGKVIHTYMSKRKLTKEMADAFVDSIIIHGKYDYEI
KLVYDDQFADLQKLKKEKEAQSR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaagagcaggaaaaacattccggaagtagtcagcagtgcaaccgtccagaca
gaggtgagcagaccgttccgggcaggattgtatgccagaatttcaatggaaacagaagaa
accttagaaagaggaacgatagaaacccaggtggaactgatgaaaaactttgtggcagat
acggaagacatcgcagttgcagaaatatataaggattctgattattctggtacaaatttc
gaccgtcctggttttacgcagatgatggaagatatcaagcatggaaaaattaactgtgtg
attgtaaaggatctatccagacttggaaggaattatgtagagacaagtaattatattgag
cgtgtatttccgttttttcatgtgcggtttcttgctgtgacggatgactttgattctttc
cgtgagggagtggatctgacagttcccttaaaaaatatcatcaatgagttttattccaaa
gaccttgcaaaaaagagcagcagtgccaaaaaagccctgtggaaagaaggaaaatttact
ggtgcatgggaaccttatggatacaggaaatcagaacaggacagacaccagctggtagtt
gacgaggaggctgccgtacatttacgagaaatttttactatgtatatggatggatgcagc
tacagcgatattgcaaaaagactgaatacagatggtatcctttccccgactttgcagagg
gaatattataaaacaggcgaaaagccttcaccggaatccaaaccttggaataattatgaa
gtgaaacgtgtacttcaggatgtccattgtaccggagattctgtatatggaaaatatcag
cagagtgtttttcaaggaaacaagcagagaaatctaccggagagtgagtggctctatgct
gagaatacccacgaaggaattattgataaagaactgttccggcaggtacaggaaaaaatc
cgggaatttacggaagcatacaaaaagaagcatcagctgaataatggagccattcggaat
cataatttctataccggcaagatcaggtgtgggggttgtgggaaccgcatggtgttgtcc
agagaaaaaacagggacattttattatatctgtggtgcagatgcgaaccataaatccgga
ggaaatcagtgtaaggggcacagagtcaaaaaagaatacgtggatgaagacgtccttcgc
ctgatccagtcacatatgaaagccgtattggatacagagaaactgatccgtgaaatgaat
tctgcttccagaaaccagacacagtatttgcttctggataaggaagtggggaaacttcgg
cgggagttgagcaggatcagcaagcgtaaatctgatttatatgaggattattcggaacgt
ctgattacagaagaagaatacatgcagttttcccgtatctattccaatgaaatagaaaac
atcaagaaccgcctggatgtagtattggcggcacaggtacggtattccaaggattatcat
atcgaggaaggatggggaaaagtgatacatacttatatgtcaaagcgtaagctgacaaaa
gaaatggcagatgcctttgtggattcaattattatccatggtaagtatgattatgagatc
aagctggtatatgacgatcagtttgcagatttacagaaattaaagaaagagaaggaggcg
cagtcaagatga
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