Ruminococcus sp. SR1/5: CK1_03540
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Entry
CK1_03540 CDS
T02601
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
CK1_03540
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Gene cluster
GFIT
Motif
Pfam:
Recombinase
Resolvase
Zn_ribbon_recom
YqhI
Motif
Other DBs
NCBI-ProteinID:
CBL18687
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Position
296932..298509
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AA seq
525 aa
AA seq
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MTDHRKTAVYIRLSAEDDNVDGRAKKESDSVTSQRILLKSFVIDQLGVDEADILEYVDDG
VSGTHFKRQGFQQLQDDMKSGEIGCVVVKDFSRFGRDYLEVGFYIEYIFPLLQIRFISIN
DSYDSAASSGMTGGMNVALQNLVYNMYSLDLSKKISSAMQTRTKNGTRLPVNARYGYKKG
KDGRLEVDPEAAKVVKMIFQMAAEGTSFADITRELNRQAIATCDEQKLSRGDQVQFQRFD
TIKKKHWSPTTVSAIVRDEIYIGTRIWGKTRCSMHTGHKAVLNDETEWVRLENHHTAIID
RELFEKANEMHPKKKRSVAESRTNFTLERRKKQPALLICANCGHSLLKETEHLLKCSDAR
TNGDPVCRSLVIRREPMEENILGLVRQYAASMLKKGKKVSSKRQCEYKEINTTELQKQSR
QLTSEKMKLYDDYKDGRIDRDSYKQRAEKISVQLDEIKRKIEDAKNSKKLLEQNELSDKI
KLKDFLGIQKFDTEKLREVIKVIRVHSQDEIEIEWNFDDIFSEQR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcatagaaaaacagctgtttacatccgtttatccgcagaagatgacaatgta
gatggcagagctaaaaaagagagcgacagtgtaacttctcagagaattctgttaaaatca
tttgtgattgatcagctgggtgtagatgaggcagatatcctggaatatgtggatgatggt
gtcagcggtactcattttaaacggcagggatttcaacagctgcaggatgacatgaaaagt
ggagaaatcggctgtgtagttgtaaaagacttttccagattcggaagagactatctggaa
gttggattttatattgaatatatttttccacttctgcagattcgatttatttcgattaat
gacagctatgacagtgcagcaagcagcggaatgactggtggaatgaatgtggcattgcag
aatctggtatacaatatgtatagcctggatttgtccaagaaaatttcatcagcaatgcag
acgagaacaaaaaatggtacacgtcttccggtaaatgccagatatggctataaaaaagga
aaagatggaaggctggaagttgatccggaggctgcaaaagtcgtgaaaatgatttttcag
atggcagcggagggaacaagttttgcagatattacaagggaattgaacagacaggcgatt
gctacttgtgatgagcagaaattatcaagaggggatcaggtgcagttccagaggtttgac
acgatcaaaaagaaacactggagccctacgacagtatcggcaatcgtccgggatgagatt
tatattggaaccagaatctggggcaaaacacgttgcagtatgcatacgggccataaagca
gttctgaatgatgaaacagaatgggttcgcctggaaaatcatcatacggcaattatagac
agggaattgtttgaaaaagcaaatgaaatgcatccgaaaaagaagagaagtgttgcagaa
tcacgcaccaattttactctggaaagacgtaaaaaacagccggccttgctgatatgtgcc
aactgtgggcattctctgttaaaagaaacagagcatctgctgaaatgttcagatgccaga
accaatggtgatcctgtgtgccgaagtctggtgattcgtagggaaccgatggaggagaat
atccttgggcttgtccgtcagtatgcagcgtcaatgttgaaaaaaggaaagaaagtatct
tccaaaagacaatgtgaatacaaagagatcaatactacagaattgcaaaaacagagccga
cagttgacctcggaaaagatgaaactctatgatgattacaaagatggtcgtatagatcgt
gattcgtataagcagagagctgaaaagataagtgtacagctggatgaaataaaacgaaag
atagaagatgcgaagaatagtaaaaagcttcttgaacaaaatgaactttctgataaaata
aaactaaaagatttcttgggaattcagaagttcgatacagagaagctgcgtgaggttatc
aaggtgatccgtgttcatagtcaggatgaaattgaaatcgaatggaattttgacgatatt
ttttcagaacagagataa
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