KEGG   Ruminococcus sp. SR1/5: CK1_05290
Entry
CK1_05290         CDS       T02601                                 
Name
(GenBank) Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rum  Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:rum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rum02048]
    CK1_05290
Enzymes [BR:rum01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CK1_05290
Prokaryotic defense system [BR:rum02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CK1_05290
SSDB
Motif
Pfam: ResIII SWI2_SNF2 EcoEI_R_C DEAD Helicase_C HSDR_N SNF2-rel_dom HSDR_N_2 AAA_19 nSTAND3 RNA_helicase AAA_lid_7 ENTH
Other DBs
NCBI-ProteinID: CBL18824
LinkDB
Position
453449..456262
AA seq 937 aa
MAENTFLREELSARHEKQQQTYVPKPLDLSEYETRKLYIDSMLIDAGWTQGKDWLNEMTV
TGMPNKSGIGRIDYVLYDDMNKPLAIIEAKRTCKDIAEGRQQAKLYADLLEKKYERRPVI
FLTNGFETRIIDGQYPERKCSVIYSKRDLEKWFNLLSMRTSLQNISVDKKIADRYYQEAA
IKAVCQSFDEKNRRKALLVMATGSGKTRTVMALCKVLVDAGWVKNILFLADRNSLVTQAK
RSFVNWMQDFSCTNLVEEKNNYMSRCVFSTYQTMINCIDTINDKEGKVFTSGHFDLIICD
EAHRSIYNKYKDIFTYFDALLVGLTATPKDEIDKNTYEVFELANGDPTYGYDLAQAVKDG
YLVDYLSVESRVKFIDQGIVYDELSEADKEIYENTFEDENGKIPEAINSAALNTWIFNED
TIKKILHVLMRDGIKIEYGQKIGKTIIFAKNHDHAEKILEIFNKEYPHLKNYAMVIDNRM
KYAQSAIDEFSDPKKLPQIAISVDMLDTGIDVPEVLNLVFFKKVMSKAKFWQMIGRGTRL
CPGLLDGEDKKKFYIFDFCGNFEFFRMNKGKASANLMALQSAVFNLQFEISYKLQDIKYQ
KDKLTAYRTALVKHMTEKVKELPRDSFTVRQHLKYVELYSEESNYQMLTYEDTLLVREEV
APLILPESDEVTAVRFDALMYGIELASLVGKKYTSARKDLLKKVSGIAGVANIPEIQAQT
ELIDQILHTDYVENAGIDEFENIRKNLRDLMKYIPDKSRNKYMTNFTDEILSTEWKEAEL
ENDDLENYKVRVEYYVRQHQDNHVIAKLKKNQSLTEKDVAELEKILWRELGTKEDYEAEF
GRKPLGEFVREMVGLDMNAAKEAFSKYLEDVNLDSRQIYFVNQIIEYIVHNGMMKDLSVL
LESPFTDRGSISEIFTDMGVWLGIKKVIDTINANAAA
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggcagaaaatactttcctcagggaagaactgtccgcacgccacgagaaacagcagcag
acatatgttccgaaacctctggatctgtctgaatatgaaaccagaaaactttacatagat
tccatgctcattgatgcaggatggacacagggaaaagactggttaaatgagatgactgtg
acaggaatgccgaataaatcagggattggacgtattgattatgttctctatgatgatatg
aataaacctctggcaattatagaagcaaaacgtacctgcaaggatattgctgagggcagg
cagcaggcgaaactttacgcagatctgctggaaaagaaatatgaacggcgtccggtaatt
ttccttaccaatggttttgaaacccggatcatagacggacaatatccggaaagaaaatgt
tcagttatttattccaaacgggatctggagaaatggtttaaccttttgagtatgcggaca
agcctgcaaaatatttctgtagataaaaagatagcagaccgctattatcaggaagccgcg
ataaaagcagtatgccagagctttgatgaaaagaatcggagaaaagccctgcttgttatg
gccacaggttccggaaaaaccagaacagtaatggctttgtgcaaggtactggttgatgcg
ggctgggtaaagaatatactttttctggcggacagaaattcactggtaacacaggcgaaa
agaagttttgtaaactggatgcaggatttttcctgtacaaatctggttgaagaaaagaat
aattatatgtcgcgatgtgttttctccacatatcagaccatgataaactgtattgatacg
ataaatgacaaagaaggaaaagtttttaccagtggtcattttgatctgatcatttgtgat
gaagcgcacagatccatttataataaatataaagatatttttacatattttgatgcactg
cttgtaggacttaccgcaacaccaaaagatgagattgacaaaaatacatatgaagtattt
gaactggcaaacggagatcccacttatggatatgatctggcgcaggcggttaaggatgga
tatctggttgattatctttcggtggaatccagggtgaaatttattgatcagggaattgta
tatgatgaactttcagaagcagataaagaaatctatgaaaatacttttgaagacgaaaat
ggaaagattccggaagcgataaattcggctgcattgaatacctggatttttaacgaagat
accattaaaaaaattcttcatgtcctgatgagagatggaattaaaattgaatacggacag
aagattggaaaaacaattatttttgcgaaaaatcatgatcatgcggaaaagatccttgag
atttttaataaggaatatccgcatttaaagaattatgctatggtgatcgataacagaatg
aaatatgcacagagtgcaattgatgagttttcagatccgaaaaaactaccgcagatcgca
atttctgtagatatgttagatacgggaattgatgtacctgaagttcttaatcttgtattc
tttaagaaagttatgagtaaagcaaaattctggcagatgatcggacgaggaacaagacta
tgcccgggattgttggatggggaagataagaaaaagttttacatttttgatttttgtgga
aattttgagtttttccgaatgaataaaggaaaagcaagcgcaaatctgatggcgttgcaa
agtgcagtttttaatcttcagtttgagatttcgtacaagcttcaggatattaaatatcag
aaagataaattaactgcgtacaggactgcacttgtaaagcacatgactgaaaaagtaaaa
gagctcccaagagatagttttacagttcgccaacatttgaaatatgtagaattatattca
gaagagtcgaactatcagatgcttacttatgaagatactttacttgtacgggaagaggtt
gcacccttgattttgcctgaaagtgatgaagtaacagcagtacgttttgatgcacttatg
tatggaatagaacttgcatctctggttggaaagaaatatacaagtgcgcgaaaagatctt
ttaaaaaaggtttccggaattgccggagtggcaaatataccggagattcaggcacagaca
gagctgatcgatcagattttgcatacagattatgtggaaaatgcaggaattgatgaattt
gaaaatatcaggaaaaatctgagagatcttatgaagtatattccggataagagcaggaat
aaatatatgaccaattttacagacgaaattctttcaacggaatggaaagaagcagaattg
gaaaacgatgatctggaaaattataaagtacgagtagaatattatgtccgacagcatcag
gataaccatgtaatagctaagctgaaaaagaatcagtcacttacagaaaaagatgtagct
gaactggaaaaaattctctggagagagcttggtacaaaagaggattatgaagcagaattt
ggcagaaagccattgggagaatttgtcagagaaatggtaggtcttgatatgaatgcagca
aaggaagctttttcaaagtatcttgaggatgtaaatctggacagcaggcagatttatttt
gtaaatcagatcattgagtatattgttcataatggaatgatgaaggatctttctgttttg
ctggaatctccgtttacggatcgtggaagcatttcggaaatctttacagatatgggtgtt
tggcttggaataaaaaaagtcattgatacgatcaacgcaaatgctgctgcataa

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