Ruminococcus sp. SR1/5: CK1_10700
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Entry
CK1_10700 CDS
T02601
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum00550
Peptidoglycan biosynthesis
rum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CK1_10700
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rum01002
]
CK1_10700
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rum01011
]
CK1_10700
Enzymes [BR:
rum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CK1_10700
Peptidases and inhibitors [BR:
rum01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CK1_10700
Peptidoglycan biosynthesis and degradation proteins [BR:
rum01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CK1_10700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Transpeptidase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
CBL19258
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All DBs
Position
900894..902060
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AA seq
388 aa
AA seq
DB search
MTRKEPVKNHIRSGNPSRGQASRAAHTASKGTKTTSMPSDRTVSARRKAQNTRMKRMRRK
RIRNTIFLLLLLIVLCTAGGFGVYMLKGGDFSTPANSFNAFSEFDNTLTSKEEQRAAGFA
HDLCVVTKDVALDSVSLDDSQSGVLLNLSDKKVLYAKGAYNKVYPASITKIMTAMLALKY
GNMDDTVTISQENVTLESGSQVAGFQAGDQVTMDQLLHCLLVYSANDAASAIAEHIGGST
DKFVEMMNSFAAELGCTGTHFTNPHGLQDENHYTTPYDIYLMLKEALNYPEFTDITQMAS
YTVSYKHSDGSDASATLPATDHYLTGEAATPKDVTILGGKTGTTDKAGNCLALLSQNAYG
KPFISIVMGASSKDVLYQEMTSLLQNIN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtaaagaacctgtaaaaaatcatatacgttctggcaatccttccagaggtcag
gcttcccgggctgcacatacagcttccaaggggacaaaaacaacttccatgccgtctgac
agaactgtttctgccagacgtaaagctcaaaatacccggatgaaacggatgcgtcgtaaa
aggatccgcaacaccatttttctccttcttctgctgatcgtactatgcacagctggcggt
tttggtgtttacatgctgaagggcggagatttttccactcctgcaaattctttcaatgca
ttctccgaatttgataatactctgacttccaaagaagagcagcgcgcggcaggtttcgcc
catgatctctgtgttgttacaaaagatgttgctctggattctgtcagtctggatgacagc
cagtccggtgtgcttctgaatctcagtgataaaaaggtactctatgcaaaaggtgcctac
aacaaggtttatcctgccagcatcacaaagatcatgacagctatgcttgcactgaaatat
ggaaacatggacgatacagtaacgatctcacaggagaatgttaccctggaatccggttct
caggtagctggtttccaggcgggagatcaggttaccatggatcagcttcttcattgtctt
cttgtttattctgccaatgatgcagcatctgccattgcggaacatataggtggatcaaca
gataaatttgtagagatgatgaacagctttgctgcagaacttggctgtacaggaactcac
tttaccaatccccatggtcttcaggacgaaaatcattatacaacgccttatgacatttat
ctgatgctgaaagaagccttgaattatccggagtttacagacatcacacaaatggcatct
tatacagttagctataagcattccgatggctccgatgcaagtgctaccttacccgctaca
gatcattatcttaccggagaggcagcaactcctaaggatgtcactatccttggaggaaaa
acaggaacaaccgataaagccggtaactgtctggcacttttaagccagaatgcttatggg
aagccatttatttccatcgtcatgggtgcatcctcaaaggatgttctttatcaggaaatg
acatccttgctccagaacatcaactga
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