KEGG   Ruminococcus sp. SR1/5: CK1_11750
Entry
CK1_11750         CDS       T02601                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rum  Ruminococcus sp. SR1/5
Pathway
rum02024  Quorum sensing
rum03060  Protein export
rum03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CK1_11750
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CK1_11750
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CK1_11750
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rum02044]
    CK1_11750
Enzymes [BR:rum01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CK1_11750
Secretion system [BR:rum02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CK1_11750
  Eukaryotic Sec-SRP protein
   CK1_11750
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_17 AAA_22 AAA_33 cobW Zeta_toxin AAA_31 MMR_HSR1 CLP1_P AAA_30 TctA MobB VirC1 APS_kinase YqeC ArlS_N AAA TrwB_AAD_bind Thymidylate_kin AAA_14 Arf nSTAND3 AAA_16
Other DBs
NCBI-ProteinID: CBL19350
LinkDB
Position
complement(982612..983964)
AA seq 450 aa
MAFESLTDKLQNVFKKLKGKGRLTEADVKVALKEVKMALLEADVNFKVVKQFTKSVQEKA
IGQDVMNGLNPGQMVIKIVNDELVNLMGSETTELPIKPGMDLTVLMMVGLQGAGKTTTVA
KLAGKLKSKGKRPLLVACDVYRPAAITQLQVNGEKQGVEVFSMGDKQNPVDIAKAAIEHA
KSNQQNVVLIDTAGRLHIDEDMMQELEDIKANVNVDATVLVVDAMTGQDAVNVAQNFSDK
VGIDGVILTKMDGDTRGGAALSIKAVTGKPIFYVGMGEKLSDLEQFYPERMASRILGMGD
VMSLIEKVEASVDQEQAQEMQKKLKKMDFDFNDYLTSMEQMNKMGGISSILNMLPGMGGK
MKDIEGMIDEKAMDRTKSIILSMTPQERSNPNILNISRKNRIARGAGVDITEVNRLVKQF
EQSKKMMKQMPGLTGGKMNMGKRGGFKLPF
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggcatttgagagtttaacagataaactgcagaatgtatttaagaagctgaagggcaag
ggccgtctcacagaggctgatgtcaaggtagcactgaaggaagttaagatggcgcttctg
gaagcggatgttaactttaaggtcgttaagcagtttacgaaatccgttcaggaaaaggct
atcggacaggatgttatgaatggtctgaatccgggacagatggtgatcaagatcgtaaat
gatgagctggtcaacctgatgggaagtgagacaacagagcttccgatcaaaccgggaatg
gatcttaccgttcttatgatggtcggtcttcagggtgcaggtaagacaacgacggttgcc
aagctggcaggcaaactgaaatccaagggaaagagaccactgcttgtggcctgtgatgtt
taccgtccggcagcgatcacacagctgcaggtaaacggtgagaaacagggcgtcgaggtc
ttttccatgggagataagcagaatcccgtggatattgcaaaagcagctatcgagcatgcg
aaatccaatcagcagaatgttgtgctcatcgatacagcaggacgtcttcacattgatgag
gatatgatgcaggagcttgaggatatcaaagcgaatgtgaatgtagatgctacagtgctt
gtagttgatgccatgacaggacaggatgcagtaaatgtggcgcagaacttttctgataaa
gtcggcattgatggtgtgatcctgactaagatggacggtgatacacgaggcggcgctgcg
ctttccattaaagccgtgaccggcaaaccgatcttctatgttggtatgggagagaagctt
tcagatctggaacagttttatccggaacgtatggcttccaggatccttggaatgggcgat
gtaatgagtctgatcgagaaggtggaagcatctgtggatcaggaacaggctcaggagatg
caaaaaaagctgaagaaaatggacttcgacttcaatgattatcttaccagcatggagcag
atgaacaagatgggtggtatttccagtatcctgaacatgcttcccggaatgggcggtaag
atgaaggatatcgagggtatgatcgatgagaaggctatggaccgtaccaagtccatcatt
ctttccatgacacctcaggagagaagtaaccccaacattttgaacatctcacgcaagaac
cgtatcgccagaggcgccggagtggatattacagaagtaaatcgtcttgtgaagcagttt
gagcagagcaagaagatgatgaaacagatgccgggattaacaggcggcaagatgaacatg
ggaaaaagaggcggctttaagcttcccttttaa

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