Ruminococcus sp. SR1/5: CK1_11880
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Entry
CK1_11880 CDS
T02601
Name
(GenBank) condensin subunit Smc
KO
K03529
chromosome segregation protein
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rum03036
]
CK1_11880
Chromosome and associated proteins [BR:
rum03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CK1_11880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_23
AAA_21
AAA_29
Microp_apicomplexa_20
Cortex-I_coil
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CBL19361
LinkDB
All DBs
Position
complement(997007..1000267)
Genome browser
AA seq
1086 aa
AA seq
DB search
MYLKNIEVQGFKSFAQKINFEFHNGITGIVGPNGSGKSNVGDAVRWVLGEQSAKQLRGGN
MQDVIFSGTELRKPLSFASVAITLDNSDHKLPVDFEEVTVTRRLYRSGESEYRINGSSCR
LKDINEMFYDTGIGKEGYSIIGQGQIDKILSGKPEERRELFDEAAGIVKFKRRKNTTLKK
LEEEQQNLVRVTDILSELTKQLEPLERQSETAKIYLAKRENLKELDINMFLLEYEHTGNL
IRELEEKTRIAENQLKEAQDAHSRTKDEYERLEKILEELNERMEALREESRDRAIRKQQL
SGEINVLHEQILAGEQNDSHYRSRLLAVQEDTEKKSTDQEALEEQKADLQANLREIDRKL
ADEQKKMDNIQSSIEECTQAVEDGKNEIIEILNSRANTKGKAQRFDAMKEQLDIRKAGIS
QRILSLKTQEEEQQSAIDQAQKEYDTITKAIQETREEGSRLTKEIHAIQETLKQQNTQLE
KKQTSYHREASRLESLRNITERYDGYGNSIRRVMEQKNHVPGIRGVVADIIHVEKNYEIA
IETALGGSIQNIVTDNEQTAKQMIEFLKKNRYGRATFLPLNSISSRGEFNQRGALNEPGA
IGLASGLVTAEKEYDGLIGYLLGRVLVVDHIDHAIAIARKYRHSIRMVTLEGESLSPGGS
MTGGAFKNNSNLLGRRREIEELEKKVKELAAGYNEIRQSMEDNRSRRNEMRDTVAALQQK
FQEQSIQQNTARLNIEQLEKKAEEIRGGYTRIEREQEEIRLQARDMQADNIKITQELEAS
KRDEEELETFIETRQKELEDWKKDEAETSEKLERIRLDASASQQKESFIKENLRRLKEEI
EVLSKEREEILDSLEKGSQETAEKRKTIDKVRKEIEGFAAKEEVAAKQLEKWQQEKEERT
KSHKEFFEKRDELSGQISLLDKECFRLKTQAEKIEENREARISYMWEEYEITPNNALQYR
KEEMNDRHVMKQQIHKLKDEIRALGSVNVNAIEDYKELLERHTFLSGQYNDLLEAEKTLE
QIIQELDEGMRKQFSEKFGEIQKEFDKAFKELFGGGRGTLELAEDEDILEAGIRIISQPP
GKNFRT
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgaaaaatatagaggtgcagggatttaaatcctttgcacagaaaataaatttt
gaatttcataacgggatcaccggcatcgtaggacctaacggcagcggaaaaagtaatgtt
ggcgatgcagtccgctgggttctgggagaacagagcgccaagcagcttcgaggcgggaat
atgcaggatgttatcttttcaggaacggagcttcgcaagcctctgagctttgcgtccgtg
gctattacacttgataacagtgatcacaagctcccggtggattttgaagaagtaaccgtt
accagaagactgtatcgttccggtgagagcgaataccgcatcaacggcagctcctgtcgt
ttaaaggacatcaatgagatgttctatgataccggtatcggaaaagaaggatattccatc
atcggacagggtcagatcgataagatcttaagtggaaaacccgaagaacgccgagagctt
tttgacgaggcagccgggatcgtcaaatttaaaagacgaaaaaataccacactgaagaag
cttgaggaagaacaacagaatctggtccgtgtcacggacatcttaagtgagctgaccaag
cagctggaaccgctggaacgtcagtctgagactgcaaaaatatatctggcaaaaagagaa
aatctgaaagagctggatataaatatgttcctcctggaatatgaacacaccggaaatctg
atccgcgagctggaagaaaaaaccaggatcgcagaaaatcagttaaaagaagcccaggat
gctcatagtcgtaccaaggatgaatatgaacgtctggaaaaaatactggaagagctgaat
gagcggatggaggcgttgagggaagaaagccgggatcgtgctatccgtaaacaacagctg
tccggtgagatcaatgttcttcatgaacagatcctggcaggagagcagaatgacagtcat
tatcgcagccgtcttttagcagttcaggaagatacggagaaaaaatctacagaccaggag
gctctggaagagcaaaaagcagatcttcaggcaaatttacgggagatcgacagaaaactt
gctgacgagcagaaaaaaatggacaatatccagagcagcatcgaagaatgcacccaggca
gtggaagatggtaagaatgagatcattgagatccttaattcccgtgcaaacaccaaaggt
aaggcacagcgttttgatgccatgaaggagcagctggatatccggaaagcaggaatcagt
cagaggatcctttccctgaaaacccaggaagaggagcagcagtcagcgatcgatcaggca
cagaaggaatacgacactatcacgaaggccattcaggaaaccagagaagaaggcagccgt
cttacaaaagagatacatgccatacaggaaacccttaaacagcagaatacacagctggaa
aagaaacagacgtcctatcatagagaggcatccagactggaatccctccgcaatatcaca
gaacgttatgatggatatggaaacagtatccgccgtgtcatggaacagaagaatcatgtt
cctgggatccgtggcgtagtggcggatatcattcacgttgaaaaaaattatgagatcgct
attgagacagctcttggcggaagtattcagaatatcgttacggataacgagcagactgct
aagcagatgatcgaattcctgaagaaaaaccggtatggtcgtgcgacttttctcccgtta
aacagcatttcttcaagaggcgagtttaatcagagaggtgctttgaacgaaccgggagct
attggtcttgccagtggcctggtaactgcagagaaggaatatgacggtctgatcggatat
cttcttggcagagtgctggtggtggatcatatcgatcatgctattgccattgccagaaaa
taccgacacagtatccgtatggtaacgttggagggagaatccttaagtccaggcggttcc
atgaccggtggagcttttaagaacaacagcaatcttcttgggcgtcgtcgtgagatcgag
gaactggaaaagaaggtaaaagagctggcagccgggtataatgagatccgacagtccatg
gaagataaccgcagcagaagaaatgagatgcgtgatacggtggcggcgctgcagcagaaa
tttcaggaacaatccattcagcagaatacagctaggttgaacattgaacagctggagaaa
aaagcggaggagatccgcggcggttataccaggatcgagagggagcaggaggagatccgt
cttcaggcaagagacatgcaggcagataacataaagatcacgcaggaacttgaagcatcc
aaaagggatgaggaagagctggaaacgtttatcgagacccggcagaaggagctggaggac
tggaaaaaggacgaagcggagacttcagagaagctggaaaggatccgtcttgacgcatct
gcatcccagcagaaggaaagcttcataaaggaaaatctgcggcgcctgaaagaggaaatc
gaagttctttcgaaagagagggaagaaattctggattctctggaaaaaggcagccaggaa
actgcagaaaagagaaagacgatcgacaaggtccgtaaggagatcgaaggctttgccgca
aaagaagaggtggctgcaaaacagctggaaaaatggcagcaggaaaaggaagagcgcaca
aaaagccataaggagttttttgaaaagcgtgatgagctgtctggccagatcagtcttctg
gacaaagaatgcttccgactgaagactcaggcagaaaagatcgaagagaaccgggaagca
aggatttcctatatgtgggaagaatacgagatcactccgaataatgccttgcagtacagg
aaagaagaaatgaatgacaggcatgtgatgaagcagcagatccataaattaaaggacgag
atccgagctcttggctctgtcaacgtcaatgccattgaggattacaaagaacttctggaa
cggcatacgttcttaagcggtcagtacaacgatcttttggaagcggaaaaaacgctggaa
cagatcatccaggagttggatgagggtatgcggaagcagtttagcgaaaaattcggagag
atccagaaagaatttgacaaagccttcaaagaactgttcggcggaggccggggaactctg
gaacttgcggaagacgaggatatccttgaggccgggatccggatcatttcccagccgccc
ggaaaaaacttcagaacatga
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