Ruminococcus sp. SR1/5: CK1_11890
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Entry
CK1_11890 CDS
T02601
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rum03019
]
CK1_11890
03009 Ribosome biogenesis [BR:
rum03009
]
CK1_11890
03036 Chromosome and associated proteins [BR:
rum03036
]
CK1_11890
Enzymes [BR:
rum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CK1_11890
Messenger RNA biogenesis [BR:
rum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CK1_11890
Ribosome biogenesis [BR:
rum03009
]
Eukaryotic type
90S particles
RNase
CK1_11890
Prokaryotic type
rRNA processing factors
CK1_11890
Chromosome and associated proteins [BR:
rum03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CK1_11890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
CBL19362
LinkDB
All DBs
Position
complement(1000281..1000961)
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AA seq
226 aa
AA seq
DB search
MENNLKKLEQTIGYQFTAKSLLEQAMTHSSYANEKHLGKLGCNERLEFLGDAVLELISSD
FLYKKFRNNQEGELTKKRASMVCEKSLAYCAREFGLPEFILLGRGEEMMGGRKRDSIVSD
GLESLIGAMYLDGGFEPAQAFVMKFILNDLEDKRIFYDSKTVLQEMVQEGGNHPVEYRLL
KEEGPDHSKSFTVEALINGKSMGTGIGHTKKAAEQAAALEAIRSIK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataatttaaaaaagctggagcagactatcggataccagtttaccgcaaaatct
ttactggagcaggcaatgacacacagctcctatgccaacgaaaaacaccttggaaagctt
ggatgcaatgagcgtctggagtttcttggagatgcggtgctggagctgatcagcagtgat
ttcctgtataaaaaattccggaataatcaggaaggtgagttgaccaagaaacgtgccagc
atggtatgtgaaaagagtcttgcctactgtgcaagagaattcgggcttccggagtttatc
ctccttggaagaggtgaggaaatgatgggcggtcgtaaaagagattccatcgtttctgat
ggcctggaatctctgatcggggctatgtatctggacggtggatttgaaccggcacaggct
tttgttatgaaatttatcctgaacgatctggaggataagaggattttttatgacagcaag
acagtgcttcaggaaatggtacaggaaggcggaaatcatccggtggaatatcgtcttctg
aaagaagagggaccggaccacagcaagagctttactgtggaggcgctgatcaatggaaaa
agtatgggaaccggaatcggccatacaaaaaaggcagcagaacaggctgcagccctagag
gcaatacgcagtataaaataa
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