Ruminococcus sp. SR1/5: CK1_15720
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Entry
CK1_15720 CDS
T02601
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CK1_15720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rum03400
]
CK1_15720
Enzymes [BR:
rum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CK1_15720
DNA repair and recombination proteins [BR:
rum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CK1_15720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CBL19680
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All DBs
Position
1324226..1325032
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AA seq
268 aa
AA seq
DB search
MITVELEHFSLDKICDSGQCFRMRKLGDGHFSMVAGDQYLEMYQKDGVVDFCCSQEEFIC
YWVLYFDLDTDYEAYMNAANPRDKYLGAAIKAGDGIRILRQDLWEMIVTFLISQQNNIKR
IRKCIETICRKYGERKNSSAGVEYYAFPTVEALSQATEEELRGCGLGYRAKYIAVTARTI
ASGQISLEKIYDMRYHQAKKELMKLCGVGEKVAECICLFALHHMDAFPIDTHIRQVMDVH
YKRGFPNRRYRGMRGIMQQYIFYYDLYS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagtagaactggaacatttcagccttgataaaatatgcgattccggacagtgc
ttccggatgagaaagcttggagacggacatttttccatggtggcgggagaccagtatctg
gaaatgtatcagaaagacggagtggtggatttctgctgctctcaggaggaatttatctgt
tactgggtgctttattttgatctggatacggattatgaagcttacatgaatgctgctaat
ccacgggataaatatctgggtgccgcaataaaggcaggagacgggatacggatattaaga
caggatctctgggaaatgatcgttacgtttctgatatctcagcagaacaatatcaagcgt
atccgcaaatgtatcgaaaccatctgccggaagtacggagagcgaaaaaattcatctgca
ggtgtggaatactacgcttttccgactgtagaggcgctgagtcaggcaacggaagaggag
ttaagaggatgcggcctgggataccgggcaaaatatatcgcagtaacggccaggaccatt
gcatccggccagatctctctggaaaaaatctatgatatgcgttaccatcaggcaaagaag
gagctgatgaagctttgtggtgtgggagaaaaggtagctgagtgtatctgcctgtttgca
ctgcatcatatggatgcttttcccatagatacccacatccgtcaggtcatggacgtgcat
tacaaaagaggatttcccaatcgcagatacagaggaatgcgtggaatcatgcagcagtat
attttttactatgacttgtactcatag
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