Ruminococcus sp. SR1/5: CK1_17440
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Entry
CK1_17440 CDS
T02601
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CK1_17440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rum02000
]
CK1_17440
Transporters [BR:
rum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CK1_17440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Tail_spike_N
Motif
Other DBs
NCBI-ProteinID:
CBL19817
LinkDB
All DBs
Position
1464772..1465812
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AA seq
346 aa
AA seq
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MKSKKAAAIMLCAVLGTSMITGVSVSAKDKDELVLYTWDGMFPQEVLDDFEKETGTKVVY
SNFDTDETMLEKLSQAKGGDYDVVIADDYIIDSAVKEGLVQKIDKDTVSNFKNINPLYQG
QFYDPDDEYTVPYGAGIPLIVYDPEQVDIDIKGYKDLWDKSLEDSIAIVGNYRVICGITQ
LSMGESMNEEDVAVIDKTGEKLKELAPNIRMIQDDNTQNALLNGEASVAFLYTSQVTQAL
KDNPDLKVVYPEEGLGFGIMGMFVPSEAPNAKAANEFINYILEPEVSAQCINYIGYYNTN
KAADDLVDESLVVPDSVTKGEIVQNVSQEAEQEYNKIWTEFKAACD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaaaaaagcagcagcgatcatgttatgtgcggtacttggaacatctatgata
acaggtgtcagtgtcagtgcaaaggataaggatgaactggtactttatacatgggacgga
atgtttccgcaggaagtgctggatgattttgaaaaagaaacagggaccaaggtggtatat
tccaactttgataccgatgagaccatgcttgagaagctttcccaggcaaagggcggcgat
tacgatgtggtaattgcagatgattacattatcgacagtgcggtaaaagagggacttgtc
cagaagatcgacaaggataccgtttccaattttaagaacatcaaccccctttatcaggga
cagttttatgatccggatgacgaatatacagtaccttacggagcaggaatcccactgatc
gtttatgatccggagcaggtagatatcgacattaaaggatacaaggatctctgggataag
tctctggaggacagcattgccatcgtaggtaattaccgcgtgatctgtggcatcacacag
ctttccatgggggagagcatgaacgaagaagatgtagccgtgatcgacaagaccggtgag
aagctgaaagagctggcaccgaacattcgtatgatccaggatgacaatacacagaatgcc
cttctcaacggagaggcaagcgtggcatttctttatacatcacaggtaacacaggcactg
aaggataatccggatcttaaggtggtttatccggaggaaggtcttggatttggtattatg
ggaatgtttgtgccaagtgaagcaccgaatgcgaaggctgccaatgaatttatcaattat
atcctagagccggaagtatctgcacagtgcatcaactatatcggatactacaatacaaac
aaggcagcagatgatctggtagacgagagcctggttgttccggacagcgtgacaaagggt
gagatcgtacagaatgtaagccaggaagcagagcaggaatacaataagatctggacagag
tttaaagctgcctgcgattaa
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