Ruminococcus sp. SR1/5: CK1_18570
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Entry
CK1_18570 CDS
T02601
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rum03032
]
CK1_18570
03400 DNA repair and recombination proteins [BR:
rum03400
]
CK1_18570
Enzymes [BR:
rum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CK1_18570
DNA replication proteins [BR:
rum03032
]
Prokaryotic type
DNA Topoisomerases
CK1_18570
DNA repair and recombination proteins [BR:
rum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CK1_18570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Rhv_5
Motif
Other DBs
NCBI-ProteinID:
CBL19913
LinkDB
All DBs
Position
1585309..1587555
Genome browser
AA seq
748 aa
AA seq
DB search
MNTKQDNIIRTDYAEIMQKSYIDYAMSVIISRALPDVRDGLKPVQRRTLYDMYELGIRYD
RPYRKCARIVGDTMGKYHPHGDSSIYDALVVMAQEFKKGRTLVDGHGNFGSIEGDGAAAM
RYTEARLEKLTQEVFLEDLDKNVVDFMPNFDETEKEPVVLPVRIPNLLVNGADGIAVGMA
TSIPPHNLGEVVDAVKAYMKNNDISTRGLMRYLKGPDFPTGGIVVNKDDLVKIYESGTGK
LRIRGRVEIEKLKGGRQQLVITEIPYTMIGANIGKFLNDIATLVETKKTTDIVDISNQSS
KEGIRIVLELKRDADVENLTNMLYKKTRLEDTFGVNMLAVADGRPETLGLKQIIAHHVDF
VFEVNSRKYTTLLAKEQEKREIQEGLIKACDVIDLIIEILRGSKSRDQVKKCLTDGITEG
IKFKTKTSEKAAKTLKFTEKQAAAILDMRLYKLIGLEIDALMKEHEETMKNIAAYEDILN
NYDSMAAVIMGELDQIKKEYGSKRKTSIENAEEAVYEEKKMEETEVCFLMDRFGYMRLID
KNAYERNKDAAHAESRYVFTCMNTDKICIFTDTGKLHTVKAEDIPLVRFRDKGVPADNLG
NYDSTSEQILYVAPLSQVAASTVLFVTENGMCKLVKGDEFRASKRTIVSTKLAEDDRLVF
VGAADEMDQVVFQSEKGYFLRIMKTEISVTKKNAMGVRGMKLTGEDRIHHAYLLESRQEY
AITYHDKPYVLNKVKLAKRDTKGVKPRI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaaacaggacaatatcatccgcaccgattatgcggagatcatgcagaaatca
tatatcgattacgccatgagcgttatcatttccagagcactgccggatgtacgtgacgga
ctgaagccggtacagcgccgtaccctttacgatatgtatgagcttggcatccgttacgac
cgcccgtaccgtaaatgtgcccgtatcgtaggagatactatgggtaaatatcatccccac
ggtgacagctccatttatgatgcgcttgtagtcatggcgcaggaatttaaaaagggtcgt
acactggtggacggacatggaaactttggttccattgaaggcgacggagccgcagccatg
cgatacacagaggcccgcctggagaagctgacccaggaggtttttctggaagaccttgat
aagaacgttgtggacttcatgccgaactttgatgaaacagagaaggagccggtagtactt
ccggtgcgtatcccaaatctccttgtaaacggagcagacggaatcgccgttggtatggct
accagtatcccgccgcataacctgggcgaagtggtggatgctgtgaaggcatacatgaag
aataatgatatcagcacccgtgggctgatgcgttatctcaagggcccggattttccgaca
ggtggtatcgtagtaaataaggacgaccttgtaaagatctatgaatctggaacaggtaag
ctccgtatccgtggacgggtggaaatagagaagctgaagggcggtcgccagcagctggtg
atcacagagattccttacaccatgatcggtgcaaacatcggaaaattccttaatgatatc
gcaaccctggtagagaccaagaagaccacagatatcgtggatatttccaaccagtcctcc
aaagaggggatccgtatcgttctggaactgaagcgcgatgcagacgtggagaaccttacc
aacatgctctataagaagacccgactggaggataccttcggtgtcaacatgctggcagtt
gcagacggaagaccggaaacactgggactgaagcagatcattgctcaccatgtggacttt
gtatttgaagtaaattccagaaaatatacaacccttcttgccaaggaacaggagaaacgg
gagatccaggaaggccttatcaaagcctgcgatgtcattgatctgatcatcgagatcctc
cgtggcagcaagagccgtgaccaggtaaagaaatgcctgaccgatggtatcacagaaggg
attaaattcaagaccaagacctccgaaaaagcggcaaaaaccctgaaattcacagaaaaa
caggccgcagctattctggacatgcgtctttacaagctgatcggtctggagatcgatgct
ctgatgaaggagcatgaggaaaccatgaagaacattgctgcttatgaggatatcctgaat
aattatgactccatggcagcagtgatcatgggtgaactggatcagatcaagaaggaatac
ggcagtaagcgtaagacttccattgaaaacgccgaggaagctgtttatgaggagaagaag
atggaagagaccgaagtctgcttcctgatggatcgtttcggatatatgcgtctcattgac
aagaatgcctacgagcgtaataaggatgccgctcatgcagagagccgctatgtctttacc
tgcatgaatacggacaagatctgtatctttacagataccggcaagctccacaccgtgaag
gcagaggatatcccgctggtgcgtttccgtgataaaggtgttccggcagataatctgggt
aattatgatagtacttccgagcagatcctttatgtggcaccgctgagccaggtggcagcc
tccacagtgctctttgttacagagaacggcatgtgcaagctggtaaaaggagatgagttc
cgtgcttccaagcgtaccattgtttccaccaagcttgcagaggatgaccgccttgtattc
gtaggagcagcggacgagatggatcaggttgtgttccagtctgaaaagggttactttctc
cgtatcatgaaaaccgagatctccgtcactaagaaaaacgctatgggtgtccgcggcatg
aagcttaccggcgaagaccggatccaccatgcgtatcttttggaaagcaggcaggagtat
gccattacctaccacgacaaaccatatgtacttaacaaagtcaaactcgccaagcgagac
accaaaggtgtgaagccgagaatctga
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