KEGG   Ruminococcus sp. SR1/5: CK1_18590
Entry
CK1_18590         CDS       T02601                                 
Name
(GenBank) HD domain./DEAD/DEAH box helicase.
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
rum  Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:rum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rum02048]
    CK1_18590
Enzymes [BR:rum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CK1_18590
Prokaryotic defense system [BR:rum02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CK1_18590
SSDB
Motif
Pfam: DEAD ResIII HD PhoH SNF2-rel_dom Cas3_HD SWI2_SNF2 AAA_22 MIOX DEAD_2 HDOD NAT10_TcmA_helicase ULD_3
Other DBs
NCBI-ProteinID: CBL19914
LinkDB
Position
1587902..1589107
AA seq 401 aa
MEEKKMNYIAHCDGEREQSILEHLQGTAEKAKDFAEVFEKGDWGYCCGMLHDIGKYSDKF
QRRIRGEEIKVDHATAGARVCMELGGMYPFLEMCIAGHHAGLSDYGVSTDTGNSSTTLGR
RKKKIEDFYAYKKEVKIPELKTSPVNVEKTKDLNFSLSMFTRMMYSCLVDADFLDTEEFM
TEERSGRQQGQEIQVLLDKLEKYITEWLKNTETESVNGRRTEILKACLENGEREKGLFRL
TVPTGGGKTVASLAFALRHAVKHHMKRIIYVIPYTSIIEQNAAVFRRILGDENVLENHCN
IDYEEAEELKPMQLASENWDKPVVVTTNVQFFESLFSNKSSKCRKLHNMANSVIIFDEAQ
MLPNDYLKPCLTAIEELVINYKVSAVLCTATQPALDAFFAI
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggaagagaagaagatgaattatattgcacattgtgatggtgaacgtgaacaaagtata
ttagagcatttgcagggaacggcagaaaaagcaaaagattttgcagaagtttttgaaaaa
ggagattggggatattgctgtggaatgctgcatgatatcggaaaatatagcgataaattt
caacgtcggattcgtggagaagaaataaaagtggatcatgcaacagcaggagcaagagtt
tgcatggaattgggtgggatgtatccgtttttggagatgtgtattgcgggacatcatgct
ggcttatccgattatggcgtcagcacagatacaggaaattcatctactacacttggaaga
agaaagaagaaaatagaagatttttatgcatacaaaaaagaagtgaagattccagagtta
aaaacatcaccagttaatgtagagaaaacgaaggatttaaatttttctttaagtatgttt
acgagaatgatgtattcttgtcttgtcgatgccgattttcttgatacagaagaatttatg
acagaagaaagatcgggacgacagcaggggcaagagatacaggtgcttctggataaattg
gaaaaatatataacagagtggctgaaaaatacagaaacagaaagtgtaaatggcagaaga
acagagattttaaaagcttgcctggaaaacggagagagagaaaaaggcctttttcggctg
acggttccgactggtggaggtaaaacggttgcatcgcttgcatttgcattaaggcatgca
gttaagcatcacatgaaacgtattatttatgtgataccttataccagtattatcgaacaa
aatgcagcagtttttcgaaggatattaggagatgaaaatgttctggaaaatcattgcaac
atagattatgaggaagcagaagaactgaaacctatgcagcttgcttctgaaaactgggat
aaaccagtagtagttacaacgaatgtacaattttttgaatccttgttttcaaataaatct
tcaaaatgcagaaaattacataatatggcaaatagtgtgatcatatttgatgaagcacag
atgttgccaaatgactatttgaaaccctgtctgacagcaattgaagaactggtgataaat
tataaggtgagtgcagtattatgtacagctacacaaccggcattggatgctttttttgca
atataa

DBGET integrated database retrieval system