Ruminococcus sp. SR1/5: CK1_18740
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Entry
CK1_18740 CDS
T02601
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rum03021
]
CK1_18740
03009 Ribosome biogenesis [BR:
rum03009
]
CK1_18740
Transcription machinery [BR:
rum03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CK1_18740
Ribosome biogenesis [BR:
rum03009
]
Prokaryotic type
rRNA transcription factors
CK1_18740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
Phytoreo_P8
Motif
Other DBs
NCBI-ProteinID:
CBL19927
LinkDB
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Position
1599653..1600846
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AA seq
397 aa
AA seq
DB search
MSRDLRDALDVLEKEKNISKDTLLEAIEQSLIQACKNHFGKADNVHVMIDPETCDFSVYA
DRTVVEHVEDPALEISLVDAQKTNTNAEIGDVMKVEIQSKEFGRIATQNAKNVILQKIRE
EERKVLYDQYYGIEKEVVTGIVQRVMGKNVSINLGKADAVLTENEQVKGETFQPTERVKV
YILEVKDTPKGPRILVSRTHPGLVKRLFESEVAEVRDGTVEIKSIAREAGSRTKIAVWSN
DPDVDAVGACVGMNGARVGAVVNELHGEKIDIINWDENPAILIENALSPAKVIAVMADPD
EKTALVVVPDYQLSLAIGKEGQNARLAARLTGFKIDIKSETQARESGDFYDDYDEEHEEA
EEEMTEEAVSEELEEVEEDTEETETEAEETADGDAEE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagatttaagagatgcgctggacgttctcgaaaaagagaaaaacatcagtaag
gatacactgctggaggcaattgagcagtcactgatccaggcatgtaagaaccatttcgga
aaggcagataacgttcacgttatgatcgatccggagacctgtgacttcagtgtttacgct
gacagaactgttgtagagcatgtggaggatccggcgctggagatttctctggtggatgca
cagaaaacaaacacgaacgcagagatcggtgatgttatgaaggttgagatccagtccaag
gaattcggacgtatcgcaacccagaatgcaaagaatgtcattcttcagaaaatccgtgag
gaagagcgtaaagttctttacgatcagtactatggaatcgaaaaagaagtggtaaccggt
attgttcagagagtaatgggcaaaaatgtcagcatcaaccttggtaaggcagacgcagta
cttacagagaacgaacaggtaaagggtgagaccttccagccaactgagcgagtaaaagtt
tacattcttgaagttaaggataccccgaagggaccgcgtatcctggtttccagaacacat
cccggtcttgtaaagagacttttcgagtccgaggttgcagaggtaagagacggtaccgtt
gagatcaagagcattgcccgtgaggcaggctcccgtaccaagatcgctgtatggagcaac
gatccggatgtagatgctgtgggagcatgcgttggtatgaacggtgcacgtgtaggggca
gttgttaacgagcttcacggtgagaagatcgatatcatcaactgggatgagaacccggcg
atccttattgagaatgcattaagccctgcaaaggttatcgcagttatggctgacccggat
gagaagaccgcactggtcgtagttccggattaccagctttcccttgctatcggtaaggaa
ggacagaacgcacgtcttgctgcaagacttacaggcttcaagatcgacatcaagagcgag
acacaggcaagagagtccggtgacttctacgatgattacgatgaggaacacgaggaagca
gaggaagaaatgacagaagaggctgtttccgaagagcttgaagaagtagaggaagataca
gaagagacagaaacagaagctgaagaaacagcagatggagatgccgaagaataa
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