Ruminococcus sp. SR1/5: CK1_18820
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Entry
CK1_18820 CDS
T02601
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rum03016
]
CK1_18820
Enzymes [BR:
rum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CK1_18820
Transfer RNA biogenesis [BR:
rum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CK1_18820
Prokaryotic type
CK1_18820
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CBL19932
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All DBs
Position
1605760..1606407
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AA seq
215 aa
AA seq
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MTGAVLSEKPVTVTEEEVREAVGSFVGEQQQVPPMYSALKVNGKKLYELAREGKTIERKP
RPVVFYEIRILDMELPLVRISVTCSKGTYIRTLCNDIGEKLGCGGAMEELLRTRSGNFTL
EESMTLSQVEEAVADGTIGEKLVSIEDVLSVYPVLTCTPEGDRLLNNGNPLPEELVQGGS
REEKVRMYKSSGNFTGIYGWDERKQKYVPIRMFFV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagctgttctttctgagaaacctgtgaccgtcacggaagaggaagtccgtgag
gcagtgggatcctttgtgggagaacagcagcaggtccctcctatgtattcggccctgaag
gtaaatggaaagaagctttacgaactggccagagaaggaaaaaccatagagcgtaagccg
cgccctgtggttttttatgagataaggatactggatatggagcttccgctggtacgcata
agcgttacctgtagcaagggcacctatatccgtacactttgcaatgacatcggagaaaaa
ttaggctgcggcggagccatggaagagctgcttcggaccaggtccggaaatttcactctg
gaagagagcatgacactttcccaggtggaggaagcggttgccgatgggaccatcggggaa
aagcttgtttccatcgaggatgtactttccgtgtatccggtccttacctgtacaccggag
ggagacagacttctcaataacggaaacccgcttccggaagaactggtacagggaggcagc
agggaagaaaaagtccggatgtataaaagcagcggaaatttcacaggaatatacggctgg
gatgaaagaaaacagaaatacgtacccatccgcatgttttttgtatga
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