Ruminococcus sp. SR1/5: CK1_19750
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Entry
CK1_19750 CDS
T02601
Name
(GenBank) phage tail tape measure protein, TP901 family, core region
Organism
rum
Ruminococcus sp. SR1/5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PhageMin_Tail
IFS
Synaptobrevin
DUF4473
ThiD2
XendoU
MitMem_reg
Motif
Other DBs
NCBI-ProteinID:
CBL20009
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Position
1679294..1682671
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AA seq
1125 aa
AA seq
DB search
MAEDFRAKVTAELDTAEAESKLNAFLNEKRKLKIDVEVNQDSAKKMASSIEKGIKDTKID
TSGISKQLAGSFNITDKNVISKLQSQMDKMISSLGKTWNGKDFDFGKASGFYSGMDSMVN
TVMKNAKIVEGATGSYDAFFNYFKDKKIYVSDELKKAMGEDTYKELLQNNIGKVVRDASK
GISIDSLWGEMSSLFPEHFSDNITNQVDQIVHAFDVLHQARADVGQVTTAQNMTAEQLTG
ISDSAAEQVVAIAAKLKESLQSNIMGASEAAKTTIDLDVNVNTDKISSDIRSAVENAGNQ
AEGALKVNMEVNEEQLVSKIREALSSLATGEEPVKVNLQVNKESLQEDLNLALNEMDLPV
HFKIDTEEIESQIRAAVESIQDMEIDLRVNTRDIQNDVDTAVNGATETPELHVPEVDSSG
LAQMQQALNGVNAAGIRGQSVFQTLGGSFREAFSAYSLANMMQDGLYKIVDAGKKAVSTV
KEFDDLKTNLAMVTGKDKTYTEDLMQSYNELGQEIGSITSDVAESANTWLRQGRSMADTN
QLIKDSMVLSKDAQMSSEDAAQVLTSTLNGFKLGADQASRINDILTSIDLKSASDAGGIG
TSLQKVASQANNVGMSLEKTAAIIATIKDVTQGSDETIGTSLKSILSRMNNIKAGKFVDD
NGEALNDVEKVLNKIGITMRDNNDQFLDSETIIDSVADKWDTLNKNTQKAVSTALGGTHQ
ANSVIAMLDNYDKVKMLTETAYNSEGTAEKKFQDNYLNSLEAKTNALKASLENLSTSLVS
DNMYSGFLDGAKAMADFAANTDILQASLAGLASAGGVYAFQQLINLFREFSNMGQAMDIS
RMTEISTDSFEQLLGLTQGLSESQTRMVLSSTALTEAQRAAVLVNQGMSEAEAQAAVAAM
GLTTANEAAAASTFTLSGAMEGMLATLMANPLILVAAGVTAAVTAYSAYKRSIEEAVSSA
KSAGNTWEENTTSIQDNISRIQELRTALASGTLTEQEAADAKSELLSIQESLSESYGNQV
SGLDLINGSLTEQIALLDQVNEKQSQSFLNENKRVLTKPRKRWRKTVIHTWVGSMITDQR
NRKQSRNPLRSFRKPMEKMYLSWTVQTESRWIFSLMRMLLRQKTH
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggattttagagcgaaagtaaccgccgagttagatacggcggaagcagagagt
aagctgaatgcttttctgaacgagaagcgaaagctgaagatagatgtggaagtgaatcag
gactctgcaaagaagatggcttccagtatagaaaaaggtataaaagatacaaagattgat
acatccggcatctccaagcagcttgccggatcttttaatattacggacaaaaatgtaatc
agtaagctgcaatcccagatggacaagatgatatccagtttgggaaagacatggaatggt
aaggattttgattttgggaaagcatcaggcttttattccggtatggacagcatggtaaac
acggtcatgaaaaacgcaaagatcgtggagggtgctaccgggagctatgatgcctttttt
aattacttcaaagataagaaaatctatgtttctgatgaactgaagaaagccatgggtgaa
gatacctacaaggaactgcttcagaataacatcggcaaggttgtccgggacgcttcaaaa
ggaatatccatagattccctgtggggagaaatgagcagcttgttcccggagcatttttca
gataacattactaatcaggtggatcagatcgtccatgcgtttgatgtattgcatcaggcc
agagcggatgtgggacaggtaacgacagcccagaacatgactgcggaacagcttacaggg
atctcagacagtgcggcggagcaggttgtagcgattgcagcaaagctgaaggagagccta
cagagtaacattatgggtgcatccgaagcagctaagacgaccattgaccttgatgtaaat
gtaaacacagataagatttcttcagatatccggtcggcagtagaaaatgcaggaaatcag
gctgaaggtgcgctaaaagtaaatatggaagtcaatgaggaacagctggtttccaagatc
cgggaagcattaagcagtcttgcaaccggagaagagcctgtaaaagtcaatcttcaggta
aataaggaatccttgcaggaggatctgaaccttgcactgaatgaaatggatcttccggta
cacttcaagattgatacggaagaaatagagagccagatccgggcagcagtagaaagtatt
caggatatggagattgatcttcgtgtgaacaccagagatatccagaatgatgttgataca
gcagtaaacggagcaaccgaaacaccggagctccatgtgcctgaagtagacagctctggt
ttggcacagatgcagcaagctttgaatggtgtaaatgcagcaggaatccggggccagagc
gtgtttcagactttaggtggaagcttccgggaagcgttttctgcatacagtctggcaaac
atgatgcaagatggactgtataagatcgtagatgcaggaaaaaaagcagtttctaccgta
aaagagtttgatgatctgaaaaccaaccttgccatggtaacaggaaaagacaagacttat
acggaagatctgatgcaaagctacaacgaattggggcaggaaatcggaagtattacttca
gatgttgcggaatctgcaaatacatggctgagacaaggacgttccatggcagataccaac
cagcttatcaaagattccatggttttgtctaaggatgcacagatgagttcagaagatgca
gcacaggttttgacttctacactgaatggatttaagcttggtgcagatcaggccagcagg
atcaatgatatcctgaccagcattgacttaaagagtgcttcggatgcaggtggaatcggt
acttccttacagaaagttgcatcacaggcgaataatgttggcatgagtttggagaaaaca
gctgccattattgctacgatcaaggatgtaacacagggcagtgatgaaactatcggtaca
tccttaaagagtattctgtctcgaatgaacaatatcaaagcaggaaaattcgtggatgat
aacggggaagcactgaatgatgtggagaaagttctgaataagatcggtattaccatgagg
gataacaacgatcagtttcttgattcggaaacaatcattgattctgtggcagataaatgg
gacactttaaataagaatacacagaaagcggttagtacagctcttggcggaacccatcag
gccaacagtgtgatcgccatgctggataactatgataaggtaaaaatgctgacagaaacc
gcttataattcagaaggaaccgcagagaagaagtttcaggacaattatttaaactctctg
gaagccaagaccaatgccctgaaagcatctctggaaaatctgtctacttctctggtatca
gataacatgtattcgggatttctggatggggcaaaagcaatggcggactttgcagcaaat
acagatatcttacaggcatctctggccggacttgcatctgctggcggtgtatacgcattt
caacagctgataaatctgttccgggagttttccaacatgggacaggctatggatatcagc
cgaatgacagagatttctacagattcttttgaacagctgttaggactgacacagggacta
agcgaatctcagacccggatggtactgtccagtacggctttaacagaagcacagagggca
gcagtccttgtaaatcagggaatgagtgaagcagaagcgcaggctgccgttgctgcaatg
ggactgaccactgccaatgaagctgctgctgccagtacctttacattatccggtgctatg
gagggaatgcttgcaacattgatggcaaatcctctgattctggttgcagcaggtgttacc
gcagcagttacggcctacagtgcttataaaagatccattgaggaagcagtaagctctgcg
aaaagtgcaggaaatacatgggaagagaacacgacttccatacaggataatatcagcagg
attcaggaattaaggacagcccttgcatccggtacactgacagagcaggaagcagcggac
gcaaagagcgagctgttatctatacaggaatctttatccgaatcctacggaaatcaggtc
agtgggcttgatctgataaacggatctcttacggagcagatcgcattactggatcaggtg
aacgaaaaacagtcccaaagcttcttgaatgaaaataaaagggtattgacaaagcccaga
aagagatggagaaaaaccgtcatacatacttgggtcggttctatgataacggatcagagg
aatcggaagcaatcaagaaatccattaagaagcttcaggaaacctatggagaagatgtat
ttaagctggacagtgcagacggaatcacgatggatattcagtttaatgcggatgcttcta
cggcaaaagacgcattga
DBGET
integrated database retrieval system
