Ruminococcus sp. SR1/5: CK1_20190
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Entry
CK1_20190 CDS
T02601
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rum03400
]
CK1_20190
DNA repair and recombination proteins [BR:
rum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CK1_20190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
DnaB_C
DUF7125
NTPase_1
AAA_16
Lon_C
Zn_ribbon_LapB
SLFN-g3_helicase
nSTAND_NTPase5
AAA_22
nSTAND3
AAA
Rad51
RecA_N
ABC_tran
AAA_24
ATPase_2
CbiA
NPHP3_N
Glyco_transf_N
NACHT
AAA_14
KdpD
Elong_Iki1
KTI12
AAA_5
MCM
AAA_33
IstB_IS21
DAP3
TK
GvpD_bR2
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
CBL20047
LinkDB
All DBs
Position
1720416..1721726
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AA seq
436 aa
AA seq
DB search
MGQCPACKAWNTFVEETVSSKKSSSGSIKTTQKKTEPVVLKDISLSSDERQSCGIGELDR
VLGGGIVPGSLVLVGGDPGIGKSTLLLQVCRNLSSQGISVLYISGEESLRQIKLRADRLG
TFNDKLKLLCETNLENIREIIERTKPDVAVVDSIQTMFHEDISSAPGSVSQVRESTNVLM
QIAKGMGVSIFIVGHVTKEGNVAGPRVLEHMVDTVLYFEGDRHASYRILRAVKNRFGSTN
EIGVFEMQNSGLEEVKNPSEFLLNGRPENASGSVVACSMEGTRPILVEIQALVCQSNFGI
PRRTAVGTDFNRVNLLMAVLEKKAGVHLAASDAYVNIAGGMKMTEPAIDLGICLAIISSA
KEIVIPDSVMAFGEIGLSGEVRAVSMAGQRVQEAKKLGFETVILPEVNRTATESIKGIKL
VYVAGIRDAISFIRGL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtgcccggcatgcaaggcatggaatacttttgtggaggaaacggtttcttcc
aaaaaatcttcctcagggagtattaaaactacacaaaagaaaacggagcctgtagttctg
aaagatatcagtctttcttcagatgaacgtcagagctgtggaatcggtgaacttgacagg
gtgctgggaggcggaatcgtccccggctcccttgttttggtaggtggagatcctggtatt
ggcaagtctacattgttgttgcaggtgtgcagaaatttatcttcacaggggatttctgtt
ttgtatatttctggtgaggagtctctcagacagatcaagctccgggcagatcggcttgga
acgtttaatgataaactgaaactgctctgtgagacgaatcttgaaaatatccgggagatc
attgagcggacgaaaccagatgtagctgttgtggattctatccagacgatgtttcatgaa
gatatttcgtctgcaccgggaagtgtttctcaggtgagggaatctaccaatgtactgatg
cagatcgctaagggtatgggagtgtccatttttatcgtgggtcatgtgaccaaggaggga
aatgtggcaggtcctcgtgtactggaacatatggtagatactgtgctttactttgaggga
gacaggcatgcttcttaccggatcctgcgtgcggtgaaaaatcgttttggttctaccaat
gaaattggtgtttttgagatgcagaattccggacttgaagaagtgaagaatccttccgag
ttccttttgaatggaagaccggagaatgcttcggggtctgttgttgcatgttctatggag
gggacgagaccgattttggtggagattcaggctctggtgtgtcagagtaattttggaatt
ccgagaagaacagcagttggtacggattttaatcgtgtgaatcttttgatggcggttctg
gagaagaaggcgggagttcatcttgctgcttcggatgcttatgtgaatattgcgggtggc
atgaagatgacagagccggcgatcgatctgggtatttgtcttgctattatttccagtgcg
aaggagatcgtgatcccggattctgtgatggcgtttggtgaaattggtctgagtggcgag
gttcgtgcagtgagtatggccggacagcgtgtgcaggaagcgaaaaagcttgggtttgag
acggtgatacttcctgaggtgaaccggacggctacagagagtattaaaggaattaaattg
gtttatgtggctgggatccgggatgcgatttcttttatcagagggttgtga
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