Ruminococcus sp. SR1/5: CK1_21730
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Entry
CK1_21730 CDS
T02601
Name
(GenBank) ABC-type sugar transport system, periplasmic component
KO
K10439
ribose transport system substrate-binding protein
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CK1_21730
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CK1_21730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rum02000
]
CK1_21730
Transporters [BR:
rum02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CK1_21730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF2478
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
CBL20173
LinkDB
All DBs
Position
complement(1874298..1875326)
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AA seq
342 aa
AA seq
DB search
MKKKSVCILLIFAAVIVLTYVTGESYYRGISEKAGLDKQEEKIYKYQYDMIVDSPDSQFW
QAVYDSAKKKAAQNNVLLEIMGPDRGTSYDKLDYMNMSIAAKADGIILQYNGEAGLEEAI
NTAVRNGIPVVTVMSDAVHSRRQSFVGVSDYQLGMAYGEIVAKYVDENTKKILILQKRDI
DDMNESQIYTQISNAVKMAAGSEDIEIKGRNLLSTGTFETEEAVTDIFQQKRNVPDILVC
MDEETTECARQAILDFNLAGKVKIIGYYTSEDILAAVEKGVISVTCDVDTTQLGQYSVEA
VTSYIEDGRTNSFYNVDINFLDRTAVKKMRREAVTDEKDPLE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaatcagtttgtatcctgctgatctttgctgccgtgatagtacttacttat
gtgacaggagaatcctattacagaggaatcagtgaaaaagcagggttggataaacaggaa
gagaaaatatataaataccagtacgacatgatcgtggacagccccgattcccagttctgg
caggcagtatatgacagtgcgaagaaaaaagcagctcagaataatgtactgcttgagatc
atggggccggacagaggaacatcctatgataaacttgattatatgaatatgagcattgcg
gccaaggcggatggtattatcctgcagtataatggagaagccggtctggaagaagcaatc
aatactgcagtaagaaacggaataccggtggttacagtcatgagtgatgcggtgcacagc
cgccgccagagctttgtgggagtcagcgattatcagcttggcatggcttacggggaaatt
gttgccaaatacgtggatgagaacacgaagaagatcctgatcctgcagaaacgggatatt
gatgatatgaacgaaagtcagatatacactcagatcagcaatgcggtgaagatggcagct
gggtctgaggatattgagatcaagggaaggaatcttctgtcaacaggaacctttgaaaca
gaggaggcagttactgatatttttcagcagaagcggaatgttccggatatccttgtgtgt
atggatgaggagacaacggagtgtgcaagacaggcaattctggatttcaaccttgcagga
aaagtgaagatcattggttattatacatctgaggatattctggcggcagttgaaaaaggt
gttatttcagttacctgtgatgtggacacgacccagctgggacagtacagtgtggaggca
gttaccagctatatagaagatggaagaaccaattctttctacaacgtagacattaatttt
cttgacagaacagcagtgaagaagatgaggagggaggcagtcacagatgaaaaagatccg
ttggagtga
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