Ruminococcus sp. SR1/5: CK1_22130
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Entry
CK1_22130 CDS
T02601
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rum03009
]
CK1_22130
Enzymes [BR:
rum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CK1_22130
Ribosome biogenesis [BR:
rum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CK1_22130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
PrmA
N6_N4_Mtase
Methyltransf_11
Methyltrans_SAM
TRM5-TYW2_MTfase
Methyltransf_4
Methyltransf_12
DUF6307
UPF0020
Ubie_methyltran
PCMT
Pho88
Motif
Other DBs
NCBI-ProteinID:
CBL20206
LinkDB
All DBs
Position
complement(1911465..1912919)
Genome browser
AA seq
484 aa
AA seq
DB search
MINKKRSGRAEGRLLEVLEKSPLETREPACQEFPSCGGCMYQTMSYEAQKEMKERQVREL
LDGAVKESLAKIGKNGDGTEEAEAADHLYHWDGIYGSPIEFGYRNKMEFSFGDEYKDGPL
SLGLHKKGSTYDILNTDDCKLVHPDMTKILVCVREFFLERNASFYKKLQHVGYLRHLLLR
RGVTSGEILVHVVTTTQEEYDLEPLKEQLLALPLEGKIVGIMHILNDSLSDVVQSDETKI
LYGKDYFYEELLGLKFKISTFSFFQPNSLAAEILYSKVREYVGDTRDKVVFDLYSGTGTI
AQLAASVASEVIGVEIVEDAVKAARENAALNGIDNCRFIAGDVLKVLDEVPEKPDMIILD
PPRDGVHPKALPKILAYGVDQIVYISCKVTSLVRDLPAFYEAGYEMTHACAVDQFCQGVH
VETIVLLSQHRDKSTRLDERGSRQIEMQASRLASLLAQKPDDTIESDLDLDELDATSAEL
KARD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatcaataaaaaacgttccggccgggcggaaggacgtcttctggaggtcctggagaaa
tctcccctggaaacaagagaacctgcctgtcaggagtttccgtcatgcggcggctgcatg
taccagaccatgagctatgaggcgcagaaggagatgaaggagcgccaggtgagagaactt
ctggatggggcagtaaaagaaagtctggctaagatcgggaagaacggtgatgggacggaa
gaagctgaggctgcagatcatttatatcactgggatgggatttacggcagtcctattgag
ttcgggtaccgcaataagatggagttttcctttggggatgagtataaggatgggccgctg
tcccttggacttcacaagaagggaagcacttacgatatcctgaatacggatgactgtaaa
ctggtccatccggatatgacgaagatcctagtctgtgtgcgggagtttttcctggagcgt
aatgccagcttctataaaaagctgcagcatgtggggtatcttcgacatcttcttcttcga
agaggcgtcacaagtggtgagatcctggtccatgtggtaaccaccacccaggaagaatat
gatctggagcctctgaaagaacagcttcttgcacttccgctggaagggaagatcgtgggg
atcatgcacattttaaatgattctttatccgacgtggtacagagcgacgagacgaagatc
ctttatggaaaggattatttctatgaagaacttcttggactgaaatttaagatcagcacc
ttttcctttttccagccaaattccctggctgcagagatcctgtattccaaggtgcgggaa
tatgtaggagataccagagataaggtagtgtttgacctttacagcggaacaggaactatt
gcacagcttgcagcgtctgttgccagcgaggtgatcggtgtggagatcgtggaagatgcg
gtaaaagccgccagagaaaacgctgcacttaacggcattgataactgtcgttttattgcc
ggagacgtgctgaaggttctggacgaggtgccggagaaaccggatatgatcattcttgat
ccgcccagagatggcgttcaccccaaagcccttccaaagatcctggcttacggcgtagac
cagatcgtatacatttcctgcaaggttacaagtcttgtgagagacctcccggcattttat
gaggcaggatatgagatgacccacgcctgtgcagtggatcagttctgccagggcgttcat
gttgagacgattgttcttttgtcccaacatcgagacaagagtactcgtctcgatgaacgc
ggcagtcggcaaatcgagatgcaagcatctcggcttgcctcgttgctcgcgcaaaaacca
gatgacacgatagagagcgacttagacttagatgagttggatgcaaccagtgctgagttg
aaggctcgtgattag
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