Ruminococcus sp. SR1/5: CK1_24100
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Entry
CK1_24100 CDS
T02601
Name
(GenBank) Transcriptional accessory protein
KO
K06959
protein Tex
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CK1_24100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
Tex_central_region
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_6
Cauli_DNA-bind
RuvC
Motif
Other DBs
NCBI-ProteinID:
CBL20371
LinkDB
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Position
complement(2092770..2094926)
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AA seq
718 aa
AA seq
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MDIIQVITRELNVEKWQVEAAVKLIDEGCTIPFISRYRKEATGTLNDEQLRNLNERLTYL
RNLEDKKAQVLGSIEEQGKLTPELKKQIEAAQTLVVVEDLYRPYRPKRRTRAIIAREKGL
GPLADIILLQMTKKPLEEEAKAFLSEEKEVKTVEEAISGARDIIAEHISDEADYRISIRK
RTMDKGTICSTARDEKEQSVYEMYYDFEEPVKKLAGHRVLALNRGEKEKFLTVKILAPEE
EIIRYLEKQVIVRDNPYTTPVLKEAIEDSYKRLIGPAIEREIRSALTEAAEDGAIHVFGK
NLEQLLMQPPIAGQVVLGWDPAFRTGCKLAVVDPTGKVLDTTVIYPTAPTNETKIRAAKE
TLKKLISKYHVTLISVGNGTASRESEQIIVELLKEIPEKVQYVITNEAGASVYSASKLAT
EEFPNFDVGQRSAASIARRVQDPLAELVKIDPKSIGVGQYQHDMNQKKLGEALNGVVEDC
VNKVGVDLNTASASLLEYISGISKAIAKNIVAYREENGRFQTRRELLKVAKLGPKAFEQC
AGFTRITGGKNPLDATSVHPESYDAAKKLLEKLGYTPEDVAERKLTGISGQIRDYGKLAK
ELEIGEPTLRDIVKELEKPARDPRDEMPKPILRTDVLDMKDLKEGMVLKGTVRNVIDFGA
FVDIGVHQDGLVHISEMSEKFIKHPLEAVSVGDIVDVRVLGVDMKKKRISLSMKGISK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggatattattcaggtaattaccagagaattgaacgttgagaaatggcaggtcgaggca
gcggttaagctgatcgatgaaggctgcaccattccttttatttccagataccgtaaggaa
gcaaccggtacactgaacgacgaacagcttcgtaatcttaatgagagacttacttattta
agaaatcttgaggataaaaaggctcaggttctgggcagcatcgaggagcagggcaagctg
actccggagctgaagaaacagatcgaggcagcgcagacactcgttgtggtagaggatctt
taccgtccgtaccgcccgaagcgccgtacacgtgccatcatcgccagggaaaaaggtctg
ggacctctggccgacatcatccttctccagatgacgaagaaacctcttgaagaagaggca
aaagcatttctttctgaggaaaaagaagtcaaaactgtggaagaggccatcagcggtgcc
agagatatcattgcagaacacatttctgatgaagcagattatcgtatcagtatccgtaag
agaacaatggataagggaactatatgttccaccgcaagagatgagaaggagcagtctgta
tacgagatgtattatgactttgaggagccggtgaaaaagcttgcaggtcatcgtgtcctt
gctctgaaccgtggtgagaaagagaaattccttactgtgaagatccttgcacctgaggaa
gagatcatccgttatcttgaaaaacaggtgatcgtccgcgataatccatacactacacct
gttctgaaagaagccattgaggacagctataaacgtctcatcggaccggctattgagcgt
gagatccgaagcgcccttacagaggcagcagaggacggtgccatccatgtctttggcaaa
aatctggagcagcttctcatgcagcctccaattgcaggacaggtagttcttggctgggac
cctgccttccgtaccggatgcaagctggcagtggtagatcctaccggaaaggttctggat
accacagttatttatcccacagcaccaaccaatgagaccaagatccgtgccgcaaaggaa
accctgaaaaagcttatcagcaaatatcatgtgacactgatctctgtaggaaacggaacg
gcatccagagaatccgagcagatcatcgtggagcttcttaaggaaatccctgaaaaggtc
cagtatgttatcaccaacgaggcaggtgcttctgtatattccgcaagcaagcttgccacg
gaagaattcccgaatttcgatgttggacagagaagcgccgcatccatcgcaagacgtgta
caggatccgcttgcagagcttgtaaagatcgatccgaaatccatcggtgtcggtcagtat
cagcatgatatgaaccagaaaaagctgggagaagcccttaacggcgttgtggaagattgt
gtaaacaaggtcggagtggatctgaatactgcgtctgcatcccttctggagtatatttcc
ggaattagcaaggccatcgcaaagaatattgtagcctaccgtgaggaaaacggccgtttc
cagacaagaagagaacttcttaaggttgccaagcttggtccgaaagcctttgagcagtgt
gcaggtttcacacggatcacaggaggcaaaaatcctctggacgcaaccagtgtccatccg
gaaagctatgacgcagcaaaaaaactcttggaaaagctgggctacacaccggaagatgtg
gcagagcgtaagcttaccggtatttccgggcagatccgcgattacggaaaactggcaaag
gagctggagatcggagagccaaccttacgtgatatcgtaaaggaactggaaaaacctgcc
agagatccacgtgacgagatgccgaaaccgatcctccgtaccgatgtcctagatatgaag
gatctgaaagagggcatggttcttaagggaactgtccgcaatgtcattgacttcggtgct
tttgtggatatcggtgtgcatcaggatggcctggtccatatttccgagatgagcgagaaa
ttcatcaaacatccgctggaagcagtcagtgtgggagatatcgtggatgtccgtgttctt
ggtgttgatatgaagaaaaaacggatcagcctttccatgaagggaatcagtaaataa
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