Ruminococcus sp. SR1/5: CK1_25260
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Entry
CK1_25260 CDS
T02601
Name
(GenBank) Transcriptional regulators
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rum03000
]
CK1_25260
03036 Chromosome and associated proteins [BR:
rum03036
]
CK1_25260
Transcription factors [BR:
rum03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CK1_25260
Chromosome and associated proteins [BR:
rum03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CK1_25260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_5
HTH_20
NirdL-like_HTH
DDRGK
HTH_11
LexA_DNA_bind
DUF501
HTH_1
HTH_9
Mga
DUF7343
Fe_dep_repress
HTH_IclR
Rrf2
Motif
Other DBs
NCBI-ProteinID:
CBL20465
LinkDB
All DBs
Position
2213560..2213886
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AA seq
108 aa
AA seq
DB search
MEHKLDNIDRKIIEMLQKNARTPVKEIAKEVFLSSPAVSARIEHLEKNGLITGYHAQINP
VFLGYHIKAFINLEVEPNQKKTFIPSSSPSQTSSNATASPAITPCSSK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaactcgacaacatcgaccgaaagatcatcgaaatgcttcagaagaacgcc
cgcaccccggtaaaggaaatcgcaaaggaagtcttcctctcatcccccgctgtttccgcc
agaatcgaacacctcgaaaaaaacgggctgatcacaggctaccacgcccagatcaacccg
gtatttctcggttatcatataaaagcattcatcaacctggaagtagaacccaaccaaaaa
aagacttttatcccttcatccagtccatcccaaacgtcatcgaatgcaactgcgtcaccg
gcgattactccatgctcatcgaagtag
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