KEGG   Ruminococcus sp. SR1/5: CK1_25260
Entry
CK1_25260         CDS       T02601                                 
Name
(GenBank) Transcriptional regulators
  KO
K03719  Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
rum  Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:rum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rum03000]
    CK1_25260
   03036 Chromosome and associated proteins [BR:rum03036]
    CK1_25260
Transcription factors [BR:rum03000]
 Prokaryotic type
  Helix-turn-helix
   Lrp/AsnC family
    CK1_25260
Chromosome and associated proteins [BR:rum03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CK1_25260
SSDB
Motif
Pfam: HTH_24 HTH_AsnC-type MarR MarR_2 HTH_5 HTH_20 NirdL-like_HTH DDRGK HTH_11 LexA_DNA_bind DUF501 HTH_1 HTH_9 Mga DUF7343 Fe_dep_repress HTH_IclR Rrf2
Other DBs
NCBI-ProteinID: CBL20465
LinkDB
Position
2213560..2213886
AA seq 108 aa
MEHKLDNIDRKIIEMLQKNARTPVKEIAKEVFLSSPAVSARIEHLEKNGLITGYHAQINP
VFLGYHIKAFINLEVEPNQKKTFIPSSSPSQTSSNATASPAITPCSSK
NT seq 327 nt   +upstreamnt  +downstreamnt
atggaacacaaactcgacaacatcgaccgaaagatcatcgaaatgcttcagaagaacgcc
cgcaccccggtaaaggaaatcgcaaaggaagtcttcctctcatcccccgctgtttccgcc
agaatcgaacacctcgaaaaaaacgggctgatcacaggctaccacgcccagatcaacccg
gtatttctcggttatcatataaaagcattcatcaacctggaagtagaacccaaccaaaaa
aagacttttatcccttcatccagtccatcccaaacgtcatcgaatgcaactgcgtcaccg
gcgattactccatgctcatcgaagtag

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