Ruminococcus sp. SR1/5: CK1_25330
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Entry
CK1_25330 CDS
T02601
Name
(GenBank) Alpha-L-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum00520
Amino sugar and nucleotide sugar metabolism
rum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CK1_25330
Enzymes [BR:
rum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
CK1_25330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Glyco_hydro_44
DUF7580
Astrovir_pp_1
Motif
Other DBs
NCBI-ProteinID:
CBL20471
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All DBs
Position
complement(2218409..2219914)
Genome browser
AA seq
501 aa
AA seq
DB search
MKKAQIIVDKYFLTGKTDKRIYGSFIEHLGRAVYEGIYQEGSPLSDEQGFRKDTLELVRE
LQVPIVRYPGGNFVSGFRWEDSVGPKTQRPSRPELAWGVIETNQFGLNEFVDWSRKAGSD
VMMAVNLGTRGPEDAKNLLEYCNFKGGTYYSDLRKAHGYEQPHDIKLWCLGNEMDGPWQM
GHKTAAEYGRVAAETARLMKFMDPEVETVACGSSSLEMPTFGSWEYTVLDEAYDQVDYLS
LHQYYGNASGDTADFLASSKGMDDFISGVVSICDAVKAKKHGKKQINLSFDEWNVWYHSN
EQDKKLEKWVQAPHQLEDVYNFEDALLVGSMLITLLRHADRVKIACMAQLVNVIAPIMTS
DTGAWRQTIFYPYMLTSVFGRGTVLNTQVLTPIYESKTYGEAPYLDSVCVWDEEKDTLTI
FAVNKSLDEDMEVSCDLRQFEGYKIVEHIVLNNDDLQAANTEAQPENVVPVKASAECSKL
DGGKLEAVFAKHSWNMIRLAR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcgcagatcatcgtggacaaatatttcctcaccggaaaaacagacaaaaga
atctatggttcctttatagaacatctcggacgtgcggtttatgaggggatttatcaggaa
ggcagccctctttctgatgagcagggatttcggaaggatactctggagttggtaagggag
cttcaggtaccgatcgttcgttatccgggcggaaattttgtatccggattccgttgggag
gacagcgtcgggccgaaaactcagcgtccgtccagaccggagctggcctggggtgtcatc
gagacaaaccagtttggactcaatgagtttgtggactggtccagaaaagccggcagcgat
gtgatgatggcagtaaacctgggaacaagaggaccggaggatgcgaaaaatcttctggaa
tactgtaactttaagggaggtacctattacagtgatctccgtaaggctcacggctatgaa
cagccgcatgatatcaaattatggtgtctcggaaacgagatggacggtccgtggcagatg
ggacataaaactgcggcagagtacggaagagttgcagcagaaactgcccgcctgatgaaa
tttatggatccggaggttgagactgttgcatgcggaagctccagtctggaaatgcctacc
tttggctcctgggagtatacggttcttgacgaggcttacgatcaggtggattatctttcc
ctgcatcagtactatggaaatgcatcgggagacactgccgattttctggcaagctccaag
ggcatggatgattttatctcaggagtggtttccatctgcgatgctgtaaaagcaaagaag
catggaaaaaaacagatcaatctttccttcgacgagtggaacgtatggtaccacagcaat
gaacaggataaaaagctggaaaaatgggtacaggcgccccatcagttggaggatgtttat
aactttgaggatgcacttcttgtgggaagtatgttgatcacacttctccgtcatgcagat
cgcgtaaagatcgcctgcatggcacagctggtaaatgttattgcaccgatcatgacatct
gatacaggcgcatggcgtcagacgatcttttatccgtatatgttgacaagtgtgtttgga
agaggaaccgtccttaatacacaggttctcacacctatatatgaaagcaagacttatgga
gaagctccatatctggattctgtgtgtgtctgggatgaggaaaaggatacgctgacgatc
tttgcagtgaataagagtctggatgaggatatggaggtttcctgcgacttgagacagttt
gagggatataagatcgtagagcatattgtactcaataatgacgatcttcaggcagccaat
acagaggctcagccggagaatgtagttcctgtaaaagccagtgcagagtgctcaaagctg
gacggcggaaaactggaagcagtttttgcaaaacacagctggaatatgatccgtcttgca
agataa
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