Ruminococcus sp. SR1/5: CK1_28720
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Entry
CK1_28720 CDS
T02601
Name
(GenBank) Transcriptional regulators
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rum03000
]
CK1_28720
Transcription factors [BR:
rum03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CK1_28720
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_7
HTH_3
HTH_38
MarR
MptE-like
HTH_Tnp_ISL3
HTH_24
HTH_23
Trp_repressor
HTH_IclR
HTH_AsnC-type
HTH_Crp_2
HTH_10
TetR_N
Motif
Other DBs
NCBI-ProteinID:
CBL20751
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Position
2523435..2524511
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AA seq
358 aa
AA seq
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MSIKKIAEKAGVSPATVSRVLNNPNYKCSVSGLRDKIWKTAIEMNYVPNEAARNLKKGVS
AKQEKTWYINILMTRTDSSTTDPFFAELLRVIESEIHDKNCILSKVWYMSVFSDDRKCRR
ENLDRLIDGMYDEVEGKRDGLIIIGRCNKEALKKLNKKYKSVVSVNRNSTNYEVDEVLCD
GKKIAAAAVEYLIFLGHKNIGYIGQCHSEDRYNGYLETLKKHDLDVIPEYVIETKQTEAE
GYEAMEKFFQSDDMPTGIYCANDISAIGMLKCLNKFRNRYYMPSIISSDDIQEAQFTRPM
LTTVSLPKEDMGKFALYLLLDRLKGGHSGIVRMELEGRLMIRNSCSSVEDSMWSDYCI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaagaagatcgcagaaaaggcaggggtttcaccggcgacggtttccagagtt
ttgaataatcccaattataaatgttctgtttccggactcagggacaagatatggaaaaca
gctatcgagatgaattatgtgcccaacgaggcggcccggaatctgaaaaaaggcgtttcc
gcaaagcaggagaaaacctggtacatcaatatcctgatgacaagaaccgattcttccaca
acggatccgttttttgcggagctccttcgggtgatcgaaagtgagattcatgataaaaac
tgcattctttccaaagtatggtatatgtctgtgttttccgatgaccggaagtgccgaagg
gagaatcttgaccggctgatcgacggaatgtatgacgaggtggaagggaaaagggacgga
ctgatcatcatcggcagatgtaataaagaggctttgaagaagctgaataagaagtataag
agtgtggtatcggtgaaccggaattctaccaattatgaagtggatgaggtcctttgtgat
gggaaaaagatcgcagcagcggcagtggaatatctgatcttcctggggcataaaaatatc
ggttatattggccagtgtcacagcgaggaccggtataacgggtatctggaaacactgaag
aagcatgatctggatgtgataccggagtatgttatcgaaacaaagcagactgaggccgag
ggttatgaggccatggaaaagttcttccagtcggacgacatgccaaccggaatctactgt
gccaatgatatttcagcaatcggaatgctgaagtgcctgaataaatttcggaaccggtat
tatatgccttcgatcatatccagcgatgatatacaggaggcacagtttaccagaccgatg
ctgacaacggtgagcttgcccaaggaggatatgggaaaatttgcattatacctgctgctg
gaccggctgaagggcgggcattccggtattgtgcgaatggagctggaaggcagactgatg
atacggaacagctgcagcagtgtggaggacagtatgtggagcgattattgtatctga
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