KEGG   Ruminococcus sp. SR1/5: CK1_28720
Entry
CK1_28720         CDS       T02601                                 
Name
(GenBank) Transcriptional regulators
  KO
K05499  LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rum  Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:rum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rum03000]
    CK1_28720
Transcription factors [BR:rum03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    CK1_28720
SSDB
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 LacI Peripla_BP_4 HTH_7 HTH_3 HTH_38 MarR MptE-like HTH_Tnp_ISL3 HTH_24 HTH_23 Trp_repressor HTH_IclR HTH_AsnC-type HTH_Crp_2 HTH_10 TetR_N
Other DBs
NCBI-ProteinID: CBL20751
LinkDB
Position
2523435..2524511
AA seq 358 aa
MSIKKIAEKAGVSPATVSRVLNNPNYKCSVSGLRDKIWKTAIEMNYVPNEAARNLKKGVS
AKQEKTWYINILMTRTDSSTTDPFFAELLRVIESEIHDKNCILSKVWYMSVFSDDRKCRR
ENLDRLIDGMYDEVEGKRDGLIIIGRCNKEALKKLNKKYKSVVSVNRNSTNYEVDEVLCD
GKKIAAAAVEYLIFLGHKNIGYIGQCHSEDRYNGYLETLKKHDLDVIPEYVIETKQTEAE
GYEAMEKFFQSDDMPTGIYCANDISAIGMLKCLNKFRNRYYMPSIISSDDIQEAQFTRPM
LTTVSLPKEDMGKFALYLLLDRLKGGHSGIVRMELEGRLMIRNSCSSVEDSMWSDYCI
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtccatcaagaagatcgcagaaaaggcaggggtttcaccggcgacggtttccagagtt
ttgaataatcccaattataaatgttctgtttccggactcagggacaagatatggaaaaca
gctatcgagatgaattatgtgcccaacgaggcggcccggaatctgaaaaaaggcgtttcc
gcaaagcaggagaaaacctggtacatcaatatcctgatgacaagaaccgattcttccaca
acggatccgttttttgcggagctccttcgggtgatcgaaagtgagattcatgataaaaac
tgcattctttccaaagtatggtatatgtctgtgttttccgatgaccggaagtgccgaagg
gagaatcttgaccggctgatcgacggaatgtatgacgaggtggaagggaaaagggacgga
ctgatcatcatcggcagatgtaataaagaggctttgaagaagctgaataagaagtataag
agtgtggtatcggtgaaccggaattctaccaattatgaagtggatgaggtcctttgtgat
gggaaaaagatcgcagcagcggcagtggaatatctgatcttcctggggcataaaaatatc
ggttatattggccagtgtcacagcgaggaccggtataacgggtatctggaaacactgaag
aagcatgatctggatgtgataccggagtatgttatcgaaacaaagcagactgaggccgag
ggttatgaggccatggaaaagttcttccagtcggacgacatgccaaccggaatctactgt
gccaatgatatttcagcaatcggaatgctgaagtgcctgaataaatttcggaaccggtat
tatatgccttcgatcatatccagcgatgatatacaggaggcacagtttaccagaccgatg
ctgacaacggtgagcttgcccaaggaggatatgggaaaatttgcattatacctgctgctg
gaccggctgaagggcgggcattccggtattgtgcgaatggagctggaaggcagactgatg
atacggaacagctgcagcagtgtggaggacagtatgtggagcgattattgtatctga

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