Ruminococcus sp. SR1/5: CK1_32050
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Entry
CK1_32050 CDS
T02601
Name
(GenBank) Cna protein B-type domain.
Organism
rum
Ruminococcus sp. SR1/5
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Gene cluster
GFIT
Motif
Pfam:
TQ
SpaA
TED_2
Gram_pos_anchor
SdrD_B
Fib-H_N
MG4
Motif
Other DBs
NCBI-ProteinID:
CBL21020
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All DBs
Position
complement(2825962..2829945)
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AA seq
1327 aa
AA seq
DB search
MLKPAKQPHIRLTALFLCVTMFLSTLFFNAHTAYAADGTIDYKAGAKIPYGDYYTSRMSF
DGNNTAYCVEPLKKTPASGKYPYNLLGKNSPLRKALYYLNGGYGYEKVIKDQYFQGWSDD
NSYVIGHLVVSYIHAGNNGDTGAFHGAPQNYIDKALEVANAIEGLPAPPESFRAFIVPGN
ASQTFAGSWYQVPNGFIELQKSSANTDISDKNGNYSLEGAKYGIYKGEELVETLVTDKKG
YAKSKELAEGSYTVKEISAPEGFAIDPSAHNVTVKAEGTSTVKVKDIPQNNPVKLLLKKL
DADTQQNSAQGTGSLANAEFTIKFYTEQSATDPGANGKKPVRTWILKTDASGEIHFTKDY
LVSGDEFFYASDGKTVCFPLGTVTVQETKAPAGYLPNESVFVQQITSTGTEETISIYNAS
SVEEQVFRGGVKIQKRDLETQGTQAQGTASLADAEFTITTLNKQPVWVGGKLYENGQAVL
TIKSDAHGIAASAADALPLGHYRIEETKAPSGYLTDGAKALEFDITQNGEIVDLTTEETS
VSNQIIRGGVKIQKRDLETGEAKPQGNASLKDAEFTITNLGPNPVLVDGTLYEKDQVVLT
LKTDEKGLASTKKDTLPYGHYRGDETKAPEGYLNEGKLSQEFHITENGKILDLTAKETAI
SNQVIRGDLEFVKVSDGDLNRLANVPFSITSKTTGESHTIVTDKNGYASTSSEWNKHTTN
TNRGETSEDGIWFGSSKPDDTKGALIYDTYILEEQRCDSNEGMNLLKIEVSVYKNHVVVD
MGTLTDDQITIGTTALDKDSNSHFAKPEEKITLVDTVEYEGLKKGQSYKLIGTLMDQESG
KPIEIDGKPVTAETTFKPKKSSGSAKVTFTFNASSLKGKTIVVFEELYQEDLKLAVHADI
TDQDQTIYFPEIGTTAKDKETDMNLSQADKEVTLVDTVAYKNLLPGEEYVMTGTLMDKET
GKPVEIDKKEVTAETTFTPKESSGTVDVIFSFDGTSLAGKTVVVFESATYDGKEFATHAD
LEDNGQTIYFPEIATTAKDKADGDHFAKTDKEITIVDTVKYSNLIPGKEYALTGTLMDKE
TKEPLQADGKPITATTTFTPEDASGSIELTFTFDGSILSGKTIVVFESLTYQEKEIAVHA
DIEDHEQSIYFPGIGTTAKDKADGDQEAVATKEVTIIDTVSYQNLIPDTPYKLVGTLMDK
TTQKEVMIDGKPVTAETEFTPKDSNGSVEVIFTFDGSTLAGHDVVVFEKLFSLEGETALE
IASHEDLDDKGQTIKLTEAPKDTPEPSKPVKTGDETTVLPYLLLAGAALLFAAGFGILYI
RKRKKDK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaccagcaaaacaacctcatatccggctaaccgccctttttctttgtgtcacg
atgtttcttagcacactctttttcaatgcccataccgcttatgctgcagatggaaccatt
gattataaggcaggagccaaaattccatacggggactattatacttcccgcatgagcttt
gatggcaataacacggcttattgcgttgaaccattaaagaaaacaccggcttccggaaag
tatccttataaccttttgggaaaaaattccccactcagaaaagctctttactacttaaac
ggtggatatggttatgaaaaggtaataaaagatcaatatttccaaggatggtccgatgac
aattcttatgtcattggtcatctggtcgtttcctatatccatgcaggaaataatggggac
accggtgcttttcatggtgcacctcaaaattatattgacaaagcattggaagttgccaac
gccattgaagggcttcctgccccaccagaatccttccgtgcttttatcgttcctggcaat
gcttcccaaacttttgcaggaagctggtatcaggttccaaacggctttatcgaactgcag
aaatcctctgccaataccgatatttccgataaaaatggcaattactctttagaaggagcc
aaatacggaatctacaaaggggaagaactggtagaaactcttgttaccgataaaaaagga
tatgcaaaatccaaagaactggcagaaggaagttacaccgttaaagaaatcagtgcccca
gaaggatttgctatagatccttccgcccataatgttacggtaaaagcagaaggaacatct
accgtaaaagtaaaggatattcctcaaaataatcccgtaaaactgctccttaaaaagctg
gatgctgacacacagcaaaattctgcacagggaaccggctctctcgccaatgccgaattt
acaataaaattctatacagagcagtcagctaccgatcccggagcaaatggtaagaaaccg
gttcgcacctggatattgaaaacagatgcctctggagaaatccattttacaaaagattat
ttggtatccggggatgaatttttctatgccagtgatggaaagaccgtctgcttcccactg
ggtacagtaaccgtacaggaaaccaaagcacctgccggctatcttccaaacgaatctgtt
ttcgtgcagcaaatcaccagtaccggtacggaagaaactatctctatttataacgcttct
tctgtcgaagaacaggtcttccgaggcggcgtcaaaattcagaagcgggatctggaaact
cagggaacacaagcacaaggaaccgcatcgcttgcagatgccgaatttaccattaccact
ttgaacaaacagccggtatgggtaggtggaaagctctatgaaaatggtcaggcagtactt
acaattaaatcggatgcacatggtattgctgcaagtgccgctgatgccctgccccttgga
cattaccggattgaagaaaccaaagcgccttccggatacctaaccgatggtgcaaaggct
cttgaatttgacatcacccaaaatggagaaatcgtagatttaacaacagaagagacttct
gtttctaaccagattatccgtggcggtgtcaaaatccaaaaacgggatctggaaacggga
gaagccaaaccacagggaaatgcttctttaaaggatgcagaatttacaatcaccaatctt
ggtccaaatcctgttcttgtggatggaaccctttacgaaaaagatcaagtagttctcact
ttgaagacagatgaaaaagggcttgcttccacaaaaaaagatactctcccttatggacat
taccggggtgatgagacaaaagcaccggaaggttatttgaacgagggaaaactctctcag
gagtttcatatcacagaaaatgggaaaattttggatttaactgcaaaagaaacagcgatt
tccaatcaggtaatccgtggcgatttagaattcgtaaaggtatctgacggagatttaaac
cggctggcaaatgtcccattttccattacctccaaaactacaggagaaagtcataccatt
gtaacagacaaaaatggctatgccagtacctcctcagaatggaataagcacactacaaat
accaatcgtggggaaacttctgaagacggaatctggtttggctcttctaaacctgatgat
accaaaggagccctgatttatgatacctatattttggaagaacaacgctgcgattccaat
gaaggtatgaacctcttaaaaattgaggtctctgtatataaaaatcacgtagtcgtggat
atgggaactttaacggatgatcagattaccattggaactactgcccttgacaaagacagc
aactcccactttgccaaaccagaagaaaaaatcactctggttgataccgtagaatacgaa
ggcttaaagaagggacagtcttataagctcatcggcacactgatggatcaggaatccgga
aagccaattgaaatagatggaaaacctgtcacagcagaaaccaccttcaaaccaaaaaaa
tcttctggttctgcaaaagtgacctttacgttcaatgcctcttctctgaagggcaaaaca
atcgtagtatttgaagaactgtaccaggaggatttaaaactggctgttcatgcggacatt
acagatcaggatcagactatctatttcccagaaatcgggaccactgcaaaagataaggaa
acagatatgaatctttcccaggcagataaagaagttacccttgtagatacggtagcttac
aaaaatcttctgcccggcgaagaatatgttatgactggaacccttatggataaagaaacc
ggaaaacctgtcgaaatagataagaaagaggttactgccgaaaccacatttactcctaaa
gaatcctctggaacggtagatgtgattttttcttttgatgggacttcccttgccggaaaa
accgtagttgtttttgaatctgctacttatgacggcaaagaatttgcaacacacgctgat
cttgaagataatgggcagaccatctacttcccggaaattgctaccactgcaaaagacaaa
gcagacggagatcattttgccaaaaccgataaagagattactattgttgatacggttaaa
tatagtaacctaattccaggaaaagagtatgcacttaccggtaccttgatggacaaagag
acaaaagaacctcttcaggcagatggtaaaccgattactgccactacgacctttactcct
gaagatgcctctggcagtattgaacttacctttacatttgatggcagcatcctgtccggc
aaaacaattgttgtctttgagtctttaacgtatcaggaaaaagagattgctgttcacgcc
gatatagaagaccatgaacagtctatctacttcccgggaattggaactactgcgaaggac
aaagcggatggggatcaggaagccgttgctacgaaagaagtaaccatcattgacaccgta
tcctaccaaaatctgattccggatactccatacaaactggtcggcacactgatggacaaa
acaacccaaaaggaagttatgattgatggaaaacctgtcacggcagaaacagaatttaca
ccaaaggattccaatggttctgtcgaagtcatcttcacttttgatggaagcacattggct
ggacatgatgtagtcgtttttgaaaaacttttttcccttgaaggagaaacagcacttgaa
attgcttcccatgaggatctggacgataaaggacaaacgataaaacttacggaagctcca
aaagacacacctgaaccttccaaaccagtcaagaccggagatgaaacaaccgttcttcct
tatcttttactggcaggtgccgcactcctctttgctgcaggatttggtattttatatatc
cgtaagcggaaaaaagataagtaa
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