Ruminococcus sp. SR1/5: CK1_32230
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Entry
CK1_32230 CDS
T02601
Name
(GenBank) Type IV secretory pathway, VirD4 components
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CK1_32230
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
MAPKK1_Int
Motif
Other DBs
NCBI-ProteinID:
CBL21034
LinkDB
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Position
complement(2845196..2847196)
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AA seq
666 aa
AA seq
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MNRKWWKFLFLLPISVCTLYAGGYAAQFIKNYQEWTSAGNFAGNGTYPQAASLHPLVCFH
TALTDFPYNLYGIFLCLVLFGLLTFLLMRMGYDRNGEISDHDRNLNYSTKGTYGTSGFMT
PDEMMKVLELTGDVKKNKGTILGKLNGKAVCLPYQTRMNKNIAVYGASGSMKSRAFARNM
IFQCVARGQEGNSGESLIITDPKSELYESMSAYLENEGYVVKAFNLVNPENSDSWNCLGE
INGQETMAQVFADVIIQNTGSGKGDHFWDNAEMNLLKALVLYVDQGFPPEARNIGQVYKL
LTMSSEKELNSLFDLLPVSHPAKVPYCIYKQASDTVRSGVIIGLGARLQVFQNKLIRQIT
SYDEIDLTLPGKQKCAYFCITSDQDSTFDFLSSLFMTFIFIKLVRYADKYGEEGKLPVAV
HILADELANTGAILELNKKISVIRSRNLSISCIFQNLPQMQNRYPYNQWQEIIGNCDTQL
FLGCTDEVTATFISNRSGDVTVGVSSEAKQLNSWRVSDYTPEYRQTKSIGKRKLLTPDEI
LRLPLDTALVILRGQKVLKVEKYDYTLHPDAKKLIPRKASEHIPEWRKNGSSEETDYRPQ
PSSGSSKRKRRSSSASIAKQKPHFTSDPVYQEPTPDDFMEDFLQENFIEDSPDSGMVPLD
KDSIMS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtaaatggtggaagttcctgtttttgcttcccataagcgtctgcactctgtat
gccggaggatacgcagcacaatttattaaaaactatcaggaatggacttctgccggaaac
tttgccggcaacggaacctatccgcaagcagcttctttacacccattggtatgctttcat
actgcccttaccgatttcccatacaatttgtatgggatttttctttgcctggttctcttt
gggcttcttacttttttacttatgcgtatgggatatgacagaaacggggagattagtgac
catgaccggaacttaaattactctacaaaaggaacctacggtacatccggattcatgact
ccagatgaaatgatgaaagttttggaactgaccggagatgtaaagaaaaataaaggaacc
attttaggaaaattgaatggcaaagccgtatgtcttccatatcaaacacgaatgaataaa
aatatcgccgtgtatggtgccagtggttccatgaaatccagggcatttgccaggaatatg
attttccagtgtgtcgccagagggcaggaaggcaattccggggaaagtttaatcattacc
gatcccaaaagcgaactctatgaaagcatgtctgcttatttggaaaacgaaggctatgta
gtaaaagcatttaatctggtcaatccggaaaactcggatagttggaattgtctgggtgaa
atcaatggacaggaaacgatggctcaggtatttgcagatgtcattatccagaatacaggt
tccggaaaaggagatcatttctgggataatgcggagatgaacctgctaaaagccctggtt
ctctatgtggatcagggatttccgccggaagccagaaatatcggacaggtttataagctc
ctgaccatgagttccgaaaaggagctgaacagtctttttgatctgctcccagtgtcccat
ccagcaaaagttccttactgcatctacaaacaagccagtgataccgtgcgaagcggagtt
attatcggattgggtgccagacttcaggtatttcagaataaactcattcggcagattacc
tcttatgatgagattgatctgacacttccagggaaacagaaatgtgcttacttttgcatt
acctcagaccaggacagcaccttcgattttttatcttccctgtttatgaccttcatcttc
atcaaactggtccgatatgcagataaatatggagaagaaggaaaacttcctgttgctgta
catatactggctgatgagcttgctaacaccggagctatcctggaattgaataagaaaatc
agtgtaatccgaagccggaatctcagcatttcctgcatctttcagaatttgccccagatg
cagaaccgctatccttataaccaatggcaggaaattatcggcaactgtgacacccagctc
tttttgggctgcacagatgaagttactgctacctttatcagtaaccgcagcggcgatgta
accgtaggggtaagcagcgaagccaagcagctcaatagctggcgggtatccgactataca
ccagaataccggcagacaaaatctatcggcaagcggaaactcttaacaccagatgaaatc
ttgcggctcccgcttgatactgctttggttatcctacgtgggcaaaaagtcctaaaagta
gaaaagtacgattataccctgcatccagacgccaaaaagctgataccaagaaaagcatcg
gaacacatacctgaatggcgcaaaaatggttcctcggaagaaacagattatcgaccacag
ccctcatccggatcatccaaaaggaaacgccgttcatcttctgcgtcaatagcaaaacag
aaaccacattttacatccgaccccgtttatcaggaacctactcccgatgattttatggag
gatttccttcaggaaaattttatagaagattcccccgactctggcatggttcctttagat
aaagattccatcatgtcataa
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