Ruminococcus sp. SR1/5: CK1_33530
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Entry
CK1_33530 CDS
T02601
Name
(GenBank) transcriptional regulator, CdaR family
KO
K02647
carbohydrate diacid regulator
Organism
rum
Ruminococcus sp. SR1/5
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rum03000
]
CK1_33530
Transcription factors [BR:
rum03000
]
Prokaryotic type
Helix-turn-helix
Other families
CK1_33530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_30
GGDEF_2
HTH_8
MuF_C
Motif
Other DBs
NCBI-ProteinID:
CBL21145
LinkDB
All DBs
Position
2938349..2939440
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AA seq
363 aa
AA seq
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MISNQVLQNTLEGLKEISRTEFCVIDTDGKVLASTFSDFEIQPADIQAFVESQADSQLVK
GFQYFKVCDDYQLEYVLVAHGDDEDTYMVGKLAAFQIQNLIVAYKERFDKDSFIKNLLLD
NLLLVDIYNRAKKLHIEADVRRVVMILELNQEKDHSSVESVKSLFGGKSRDFITAVDEKS
IIIVKELEEGEGYPEMDKLAHTIMDTLDLNKDGEDVHMAYGTIVNELKEVSRSYKEARMA
LDVGKIFFGDREVIAYSSLGIGRLIYQLPIPLCKMFIREIFDNKSPDDFDEETLVTIDKF
FENSLNVSETSRQLYIHRNTLVYRLDKLQKSTGLDLRVFEDAITFKIALMVVRYMKYMET
LEY
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatatcgaatcaggtgttacagaatacgctcgagggacttaaagaaatatcaaggacg
gaattttgtgtcattgacacagacggcaaggtacttgcgtctaccttttctgattttgaa
atccagccggcagatatccaggcttttgtagaatcccaggcggacagccagcttgtcaag
ggatttcagtactttaaggtctgtgatgattatcagttggaatatgtcctggtagcccac
ggagatgatgaggatacttatatggtaggcaagcttgcagccttccagatccagaatctg
atcgttgcgtacaaggagcgttttgacaaagacagctttatcaagaatcttcttcttgat
aatcttcttctagtggatatttacaacagagcgaagaagcttcatattgaagcagatgtc
cgtcgtgtagttatgatcctggaactgaatcaggagaaagatcacagctctgtggagagc
gtgaaaagcctttttggcggaaagagcagagattttatcactgctgttgatgagaagagc
atcattatagtcaaggaactggaagagggagagggctatccggagatggataagctggct
catacgattatggatactctggatctgaataaagatggtgaggatgtccacatggcatac
ggtaccattgtcaatgagttgaaagaagtttcacgttcctacaaggaagcgcgtatggcc
cttgatgtaggtaagatcttcttcggagacagggaagttatcgcatacagctcacttgga
atcggacgcctgatctatcagctgcctattcctctgtgtaagatgtttatccgcgagatc
tttgacaacaaatctccggatgatttcgatgaggagacacttgtcaccatcgataaattc
tttgagaacagtctgaacgtatctgaaacttcacgtcagctgtatatccacagaaatacg
ctggtatatcgtctggataaactccagaagagtacaggccttgatttgagagtgtttgag
gatgccattacatttaagatcgcgctgatggttgttcgatatatgaaatatatggaaacc
ttagagtattaa
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