Ruminococcus sp. SR1/5: CK1_39520
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Entry
CK1_39520 CDS
T02601
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum03030
DNA replication
rum03430
Mismatch repair
rum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK1_39520
03430 Mismatch repair
CK1_39520
03440 Homologous recombination
CK1_39520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rum03032
]
CK1_39520
03400 DNA repair and recombination proteins [BR:
rum03400
]
CK1_39520
Enzymes [BR:
rum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK1_39520
DNA replication proteins [BR:
rum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK1_39520
DNA repair and recombination proteins [BR:
rum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK1_39520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delta2
DUF6319
DNA_pol3_gamma3
Sigma70_r4_2
Hormone_3
Motif
Other DBs
NCBI-ProteinID:
CBL21618
LinkDB
All DBs
Position
complement(3492734..3493828)
Genome browser
AA seq
364 aa
AA seq
DB search
MNPVESQIFAWVLHFRQLSYKLDYRENQTGVQRLKNIQEDIKTGKFKQAYLLYGEEAYLK
QQYKRNLVKALNPDDDTMNFTRYEGKGIDVRELLSLCDTMPFFAERRVVLLEDTGFFKNK
CEELADYMKALPDYLYLVFCESEVDKRSRMYKAVKACGSIGEFKQQDEKTLMRWAAGILG
KNGRRITQRDVELLLTMTGTDMGNIRMELEKLISYTVGRDVVTAADIQAVCTTQTTNKIF
DMVRAVTEKNQKRALDLYYDLLTLREPPMRILFLLAKQFRQICLTKKMSQEGLSQTEIAS
KLGVPSFVVRNLASCARSYTVEELENAVRDFVDAEEAVKTGTLGDVLSVELLIVKYSSAR
AVRA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggtggaaagtcaaatttttgcttgggtgttgcatttccggcagttgtcgtat
aaactggattacagagaaaatcagacaggggtacagagattgaagaatattcaggaagat
attaaaacaggaaaatttaagcaggcatatctcctttacggtgaggaagcctatctgaaa
caacaatataaaagaaatctggtgaaggctctgaacccggacgatgataccatgaatttt
accagatatgaggggaaggggatcgatgtccgggagcttttgagtctttgtgataccatg
cccttttttgcagagcgaagagtagtccttcttgaggatacgggattctttaagaacaaa
tgcgaggaactggcagattatatgaaagctctgcctgattatctgtatctagtgttctgc
gagtctgaagtagataaaagaagccgtatgtacaaggcggtaaaagcctgcggcagcatc
ggggaatttaaacagcaggatgaaaagactcttatgcggtgggcggcagggatccttgga
aaaaatggccgcaggatcacccagagagatgtggagcttctgctgaccatgacgggaaca
gatatgggaaatataaggatggagctggaaaagctgatctcctatacggtcggaagagat
gttgtgacggctgcagatatccaggctgtctgtaccacgcagacaaccaataagatcttt
gatatggtgcgtgcggtgacggagaagaaccagaagcgggccctggatctgtactatgac
cttctgacccttcgggaaccgccgatgcggatattgtttcttttggcgaaacagtttcgt
cagatctgcctgaccaagaaaatgtcacaggagggtctttctcagaccgagatcgcttcc
aaactgggagtaccctcttttgttgtgcggaatctggcatcctgtgccagatcctacact
gtggaagagctggagaatgctgtgcgggattttgtggatgcggaagaggcggtaaagaca
ggtacacttggagatgtgctcagcgtggagcttctgatcgtgaagtatagctcggcgaga
gcagtgagagcctga
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