Runella rosea: DR864_04050
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Entry
DR864_04050 CDS
T05537
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
run
Runella rosea
Pathway
run03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
run00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR864_04050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
run03019
]
DR864_04050
Enzymes [BR:
run01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DR864_04050
Messenger RNA biogenesis [BR:
run03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR864_04050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
AAA_19
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AXE16962
UniProt:
A0A344TE91
LinkDB
All DBs
Position
complement(934652..935944)
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AA seq
430 aa
AA seq
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MTFDSLNLIEPILRSIKTEGYTTPTPIQEQAIPIVLEGKDLLGCAQTGTGKTAAFAIPIL
QLLVQRQTHATRREKRTIKALILTPTRELAIQIGESFAAYGRHTGLKHTVIFGGVKQLRQ
TDSLQNGVDILIATPGRLIDLMAQRFVSLKHLEIFVLDEADRMLDMGFVHDVRRIIAVIP
PQRQSLFFSATMPPEIVKLADTILVKPEKVEVTPVSSTVDIIQQSVFFVDKDNKNALLLH
ILEDKSIETALVFTRTKHGADKVVKVLLRHEIKAEAIHGNKSQNARQNALNNFKEKTTRV
LVATDIAARGIDVDELAYVINFEIPEIPETYVHRIGRTGRAGAKGTAYSFCDNEERGSLK
DIQKLIAKVIPVVEEHPFPLSQKPGNEAPKPHNVARGNRPSRPNSHSQNQSKPSGATTDR
DKKPWFKRSR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgattcattaaatttaatagagcctattctgaggtcaataaaaacagaaggc
tacactacccccacacccatacaagaacaagccattccgatcgtacttgaaggaaaagac
ctgttgggatgcgcccaaacaggaactggtaagacggcggcttttgccattcccattctt
cagttgttggtgcagcgccaaacgcacgctactcgccgcgaaaagcgtaccatcaaggca
cttattttgaccccaacccgtgagttagccatccaaatcggtgaaagttttgccgcctat
ggccgtcatacgggattaaagcataccgtgatttttggtggggtaaaacaattacgtcaa
acggattctttgcaaaatggcgtagatattttaatcgcaaccccaggtcgattgattgac
ctgatggcgcagcgttttgtaagtttaaagcaccttgaaattttcgtgttggatgaagcc
gaccggatgcttgatatgggctttgtacacgatgttcggagaatcattgccgtgattcct
ccgcaacgccaatctttgttcttttcggcaacgatgcctcccgaaatcgtaaagctggcc
gatactattttggttaaacccgaaaaagtagaagtgacgcccgtttcttcgaccgttgat
atcattcagcaatccgtgttttttgttgataaagacaataaaaatgcgttgttgctccac
attttggaggataaatccattgaaacggccttggtttttacccgtacaaagcacggggct
gataaagtggtgaaggtgctattacgtcatgagattaaggcggaagcaattcacggcaat
aaatcgcagaatgcccgtcaaaatgcgttgaacaacttcaaggaaaaaaccactcgggtg
ttggtggcgaccgatattgcggctcgcggaatagatgtggatgaattggcgtacgtgatt
aattttgagattcccgagattcccgaaacttacgtgcaccggattggacgtacggggagg
gcaggagccaaaggaaccgcctattcgttttgtgataatgaagaaagaggttcgttgaaa
gatattcaaaagctgattgccaaggtgattccagtggtggaagaacatccttttccatta
agtcagaagcccggtaacgaagcgcccaagccacataatgttgcccgaggtaatcgtccg
agtcgaccgaattcgcattcacaaaatcagtccaaaccttcaggcgcaacgactgaccgg
gataagaagccttggtttaagagaagccgataa
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