Runella rosea: DR864_05885
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Entry
DR864_05885 CDS
T05537
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
run
Runella rosea
Pathway
run03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
run00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR864_05885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
run03019
]
DR864_05885
03400 DNA repair and recombination proteins [BR:
run03400
]
DR864_05885
Enzymes [BR:
run01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DR864_05885
Messenger RNA biogenesis [BR:
run03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR864_05885
DNA repair and recombination proteins [BR:
run03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DR864_05885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
GMT-wHTH
HemN_C
HTH_IclR
Phage_fiber_2
Motif
Other DBs
NCBI-ProteinID:
AXE17294
UniProt:
A0A344TF73
LinkDB
All DBs
Position
1385713..1387617
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AA seq
634 aa
AA seq
DB search
MIHEILKQYWGYDQFRPLQEDIIQSVLAKRDTLALLPTGGGKSLCFQIPALAMEGVCIVV
TPLIALMKDQVEQLRRRHIMAAAIYSGMNWHEIDIVLDNCIHGTTKFLYVSPERLRADIF
LTRAKMMKINLLAIDEAHCISQWGYDFRPSYLQIAEFHALIPDVPIIALTASATEPVKLD
ICEKLQMREPAVFQATFARSNLSYSAFFEENKDSRLVRILQNVPGSAIIYVRNRRRTKEV
ADWLNRQGIRAEFYHAGIPTKQRGEKQEAWIRNRVRVMVATNAFGMGIDKPDVRVVIHID
LPDNLEAYYQEAGRAGRDGQKAYAVALYSPKDLNELVRNVEQKYPPIELVRRVYQALANF
YRVPVGGGELEYFDFDLQTFTGTFGLPASETHYAIKLLEEEGFLQLSDAYNSSSKIHIVV
DNRALYDLQLKYPQYDSFIKLLLRIYGGEIFTQFVNISETVIGQKHYIMEPDVVKMLQSL
HDLGVLVYEKQRDKPQLSFLTPRYDADMMPINALAIQEKHRADLERIEAVANYVQHSTRC
RTQLLQQYFGEHTDERCGICDNCLAKKKKTPANPENGKLKAEILRLLNLSPLTPQQLVAS
FGIKNEQAAIDTIRELLEDEVVLYEGEGTLRLRQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgattcacgagattcttaaacaatactggggatacgaccaatttcggcctttacaggaa
gatatcattcagtctgtgctggccaagcgcgataccttggccctgttgcccacgggcggc
ggtaagtcgctgtgttttcaaattcctgccttggccatggagggcgtttgcattgtggtt
accccgttgattgccctcatgaaagaccaggtggagcaactgcggcggcgacacatcatg
gccgccgccatttattcgggcatgaactggcacgaaatcgacattgtgctcgacaactgc
atccacggcaccaccaagtttttgtacgtttcgcccgagcggctccgggccgatattttt
ttgacgcgggccaagatgatgaaaatcaacctgctcgccatcgacgaagcgcactgtatc
tcgcaatggggttacgattttcgaccttcgtacctgcaaattgccgagtttcacgccctg
attccagacgtgcccatcatcgccctcactgcctcggccaccgagcccgtaaagctggat
atttgcgaaaagctacaaatgcgcgaacctgccgtttttcaggcgacgtttgcccgttcc
aatctttcgtattcggctttttttgaagaaaacaaagactcccgccttgtcagaatattg
cagaacgtgcccggttcggccattatttacgtgcgcaaccgccgtcgcaccaaagaagtg
gcggattggctgaaccgacaaggcattcgggcggaattttaccacgcgggcatccccacc
aaacagcgcggcgaaaaacaggaagcttggattcgcaaccgcgtgcgggtcatggtggcc
accaatgcctttggcatgggtatcgacaaacccgacgtgcgggtggtgattcacatcgac
ctgcccgataacctcgaagcctactaccaagaagcgggacgcgctgggcgagatggccaa
aaagcctacgctgtggcgctgtattcgcccaaagacctgaacgaacttgtacgcaacgta
gagcaaaaatacccgcccattgagctggtcaggcgcgtgtatcaggcattggccaatttt
taccgcgtgcccgtgggtggcggcgaactggagtatttcgactttgatttacagaccttt
acaggaacgtttggcttgcccgcttccgaaacccattacgctatcaaattgcttgaagaa
gaaggttttctgcaattgagcgacgcgtacaacagctcgtcaaagattcacattgtggtc
gacaatcgcgcgttgtacgaccttcaactcaaatatccgcagtacgatagttttatcaaa
ttgctgctgcgaatatacggcggcgaaattttcacgcagtttgtcaacatttccgaaacc
gtcatcgggcaaaaacactacatcatggaacccgacgtggtgaagatgctgcaaagcctg
catgatttgggtgttttggtgtacgaaaagcaacgcgacaagccgcaattaagcttcctg
acgccccgctacgacgccgacatgatgcccatcaatgccttggcgattcaggaaaaacac
agggccgaccttgagcgcatcgaggccgttgccaattatgtgcagcattccactcgctgc
cgcacccagttgttgcaacagtattttggagaacacaccgacgaacgttgcggaatttgt
gataactgtttggcgaaaaagaaaaaaacgcccgccaatcccgaaaacggcaagctcaaa
gcagagattttgcggctgctaaatttaagcccactcacgccccaacagttggtagcatcc
ttcggcattaaaaacgaacaagccgccattgacaccattcgggaactattagaggatgaa
gtggttctctatgaaggagaaggcacattgcgactgcgtcagtag
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