Runella rosea: DR864_07280
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Entry
DR864_07280 CDS
T05537
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
run
Runella rosea
Pathway
run03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
run00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR864_07280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
run03021
]
DR864_07280
03019 Messenger RNA biogenesis [BR:
run03019
]
DR864_07280
Transcription machinery [BR:
run03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DR864_07280
Messenger RNA biogenesis [BR:
run03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DR864_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_25
AAA_22
Mor
AAA
Motif
Other DBs
NCBI-ProteinID:
AXE17547
UniProt:
A0A344TFX6
LinkDB
All DBs
Position
complement(1701547..1703361)
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AA seq
604 aa
AA seq
DB search
MLSIDDLNLKLLSELRVLAEQLGIKDQNKYSKKDLINRIFEQQTASAASEAVIPPKRVRK
PASSTPAPAPSVPKAEELPIPSAPVAEEKVVKKVEEPVKQMPIAHKRPQSHSFVSDNFDK
RSKRQRIQKEKEEEPELSFFNAPAEVAVPQVPAPVSEEMVPASLMEEGEDFGDLKIDLPE
EEFLDTSFITENLEVEPVAEVGPPKPEERPREYRGDDVHNKIKRQYNNYVKEFDGLIVNE
GVLEIMSDGGYGFLRSADYNYLASPDDIYVSPSQIKLFGLKTGDSIRGSVRPPKEGEKYF
ALLRVETVNGKTTEEIRDRIPFEYLTPLFPEEHIKLSGKADNYSARVLDLFAPIGKGQRG
MIVAQPKTGKTVLLKEIANAITRNHPEIYLIILLIDERPEEVTDMQRSVRAEVISSTFDE
QADRHVKVSGMVLEKAKRMVECGHDVVILLDSITRLARAYNTVTPASGKILSGGVDANAL
HKPKRFFGAARNVEHGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRRLANKRI
YPAVDVMASGTRREDLLLDKETLQRMWILRKHLSDMNPNEAMDFLLDRMKGTRSNEEFLV
SMNR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcattgacgatcttaacctcaagctcctgtccgagctacgggtacttgccgaa
caactcggtatcaaagaccaaaacaagtattctaaaaaagacctcattaaccgaattttc
gaacagcaaacggcatcagcggcttccgaagctgttatcccgcccaagcgcgttcgtaaa
ccggctagcagtacacctgcccctgcaccttctgttcctaaagcggaagaactgcctatt
ccttcggcacccgtagctgaagaaaaagtggtgaaaaaagtagaggagccagtaaagcag
atgcctattgctcacaaacgtccgcaatctcattcatttgtgtcagacaacttcgataaa
cgttcaaagcgccaacgaatacaaaaagaaaaagaagaagagcctgaactttcctttttc
aatgcccccgcggaagtggctgttcctcaagtacctgctcctgtttcggaagaaatggta
cccgcttcgttgatggaagaaggagaagatttcggcgatctcaaaattgatttgcccgaa
gaagaattcttagatacttcttttattacggaaaatctcgaagtagagccggtagcggag
gtaggcccacccaaacccgaagaacgaccgcgtgaataccgtggcgacgatgtccacaac
aaaatcaaacgtcagtataacaactacgtaaaagaatttgacggacttatcgtcaacgaa
ggagtgctcgaaattatgtcggatggtgggtacggatttctgcgctcagccgattataac
tacctcgccagcccggatgacatttatgtatcaccgtcacaaatcaaactttttggtttg
aaaacgggtgatagcattcgtgggtcagtgcgaccgcccaaagaaggtgaaaaatatttt
gccttgcttcgcgtcgaaaccgtcaacggaaaaaccaccgaagaaatccgtgaccgtatt
ccgtttgaatatttaacgccgttattcccagaagaacacattaagttgagtggcaaagcc
gacaactactcggcacgggtgttggacttgtttgcccctatcggtaaaggccaacgtggt
atgattgtggcccaacccaaaacgggtaaaaccgtgttgttgaaagagatagccaacgct
attacgcgcaatcaccccgaaatttatttgattatcctcctcatcgacgagcgccctgag
gaagtgaccgatatgcagcgcagtgtgcgggcggaagtgatttcgtctacctttgacgag
caggccgaccgtcacgtcaaagtgtcgggtatggtgctcgaaaaggccaaacgaatggta
gaatgcggccacgatgtggttattttgctagactcaattacgcgtttggcacgggcatac
aataccgttacacccgcttcgggtaaaatcctgtcgggtggggtagatgccaatgcattg
cacaaacccaagcgcttttttggggcggcccgtaacgtggagcacggtggctcgttgacc
atcattgccacggccttgattgatacgggttcaaaaatggacgaagtaatctttgaagaa
ttcaaaggaacgggtaacatggaactccaacttgaccgtcgtttggccaacaaacgtatt
tatcctgccgttgacgtgatggcttcaggaacgcgccgggaagatttgttgcttgacaaa
gaaaccctacaacgtatgtggattctgcgtaagcacttgtctgacatgaaccccaacgaa
gccatggacttcctgctcgaccgtatgaaaggtacccgaagcaacgaagagtttttggtt
tcgatgaaccgataa
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