Runella rosea: DR864_10370
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Entry
DR864_10370 CDS
T05537
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
run
Runella rosea
Pathway
run03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
run00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR864_10370 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
run03019
]
DR864_10370 (recQ)
03400 DNA repair and recombination proteins [BR:
run03400
]
DR864_10370 (recQ)
Enzymes [BR:
run01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DR864_10370 (recQ)
Messenger RNA biogenesis [BR:
run03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR864_10370 (recQ)
DNA repair and recombination proteins [BR:
run03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DR864_10370 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
HTH_40
ESCRT-II
Motif
Other DBs
NCBI-ProteinID:
AXE18112
UniProt:
A0A344THJ1
LinkDB
All DBs
Position
complement(2438602..2440842)
Genome browser
AA seq
746 aa
AA seq
DB search
MIQVDTGVQHTLKERLKEIFGYSQFRGEQEAIINSIMGGNNTFVIMPTGAGKSLCYQLPA
ITTEGIAIVISPLIALMKNQVDQLNAFGINAQFLNSTLNKAEINKVKKDALDGTLKLLYI
APESLTKEENLDFLQRANISFVAVDEAHCISEWGHDFRPEYRRIRGIIDNINPELPLIAL
TATATPKVQQDIVKNLRMEEAAMFKTSFNRKNLYYEVRPKLGDVNKQLIKYIKNNKGKSG
IIYCLSRKTVEEVANLLNVNDVKALPYHAGLDSSTRMHNQDAFLNEEADVIVATIAFGMG
IDKPDVRFVIHYDAPKSLEGYYQETGRAGRDGLEGNCVMFYCIDDIQKLEKFNKDKSVTE
RDNARHLLNEMVAYANLGACRRRQLLSYFGEYMEKDCGFCDNCVKPTQRIRIQEEAVLVL
KAIDQTDERFDGDHIADLITATDNIYVTSYEHNKLEMYGAGKFKDEEEGEEYGVEFWRSM
IRQLVIFGFLSKDSENFGVLKMTEKGRKFIKDPYPITISKDHTFDESEIQKANDEEDVTD
LAPAGGGNAYDEALLGLLKALRKKLAKEKNLPPYVIFQDPSLEEMATTYPTTSQEMAQIN
GVGMGKVSKFGRPFIDLITKYVEENEIETAKDVVVKSAANKSKVKIFIIQQIDRKVDLDE
IAEAKGLGMDELIEEIEHICYSGTKLNLDYYINQIMDRDRQRDIYDYFMATETDSIAVAM
DELAEEDVTEDELRLMRIKFLSEVAN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggtagacacaggcgtacagcatacgcttaaagagcgactcaaagaaatattt
ggttacagtcagtttagaggagagcaggaggctatcatcaatagcatcatgggcggcaat
aatacctttgttattatgcctactggtgctggaaaatccctgtgctatcagctgccggcg
ataacaaccgaaggtattgctatcgttatctcgccccttattgcgttgatgaaaaatcag
gtggatcaactcaacgcattcggaatcaatgcccaatttttgaattctaccctcaacaag
gctgaaattaataaagttaaaaaagacgccttagacggaaccttaaaactgctatacatt
gctcctgaatcgttgaccaaagaggagaaccttgattttctgcaaagagccaatatttct
tttgtggcggtagacgaagcgcactgtatttctgagtggggccatgatttccgacctgag
tatcgtcgtatccggggaattattgataacatcaaccctgagctgccgcttattgctttg
actgccaccgctacacccaaagtgcagcaggatattgtcaagaacttacggatggaagaa
gcggcgatgtttaaaacatcgtttaaccgtaaaaacctgtactacgaagtacgtcctaaa
ttaggagatgttaataaacaactcatcaaatacattaaaaacaataaaggtaaatcgggt
atcatctattgcttgagccgtaaaacggtagaagaagtggccaatttgctgaatgtgaat
gatgtaaaagcacttccttatcatgcaggattggactcgtcgacccggatgcacaatcag
gatgcctttctcaatgaggaagccgatgtgattgtggcaaccattgcttttggaatggga
atcgacaagcccgacgtgcggtttgtgattcactacgacgcacccaaatcgctggaagga
tattatcaagaaacaggacgtgcaggacgcgatggtttggaaggaaattgtgtcatgttt
tattgcattgatgacattcagaaactggagaaattcaacaaagataagtctgtaacagaa
cgtgataatgcgcgccatttgctcaacgaaatggtggcctacgccaatcttggcgcgtgc
cgccgccgtcagttgttgagttattttggagagtacatggagaaagactgcgggttttgc
gacaattgcgtcaagcctacccagcgaattaggattcaggaagaggcggttttggtcctt
aaagccatcgatcaaacggatgagcgatttgatggagaccatattgccgacctgattacg
gcaaccgacaacatctacgtaacaagctacgagcacaacaagctcgaaatgtacggcgct
ggtaaatttaaagatgaagaagaaggggaagaatacggagtagaattctggcgctccatg
attcgtcaactggtgatttttggatttctgtctaaggattccgaaaatttcggggtctta
aaaatgacggaaaagggacgcaaatttatcaaggacccttatccaattacgatttccaaa
gatcatacgtttgatgaaagtgagatacagaaagcaaatgatgaagaagatgtaacggat
cttgcccctgcgggcgggggcaatgcctacgatgaagcgcttttaggtttattaaaagca
ttgcgtaagaagctggcgaaagaaaaaaaccttcctccgtacgtgattttccaagatccg
tcgttggaagaaatggccactacttatcccactacgtcccaggaaatggcccaaatcaac
ggggtcggaatgggaaaagtgtcgaaatttggacgaccgtttattgatttaatcaccaaa
tacgttgaagaaaatgagatagaaaccgctaaagacgtagttgtaaaatcagcagctaac
aagtctaaagtgaaaatttttattattcagcagatagaccgaaaagtggatttggatgag
attgcggaagcaaaagggcttgggatggacgagttgattgaggagattgaacacatttgc
tactccggtacaaaactaaacctggattactacatcaatcagattatggaccgtgaccgc
caacgggatatttatgattacttcatggcaaccgaaactgatagtatcgcagtggccatg
gatgagttggcggaggaagatgtcaccgaagacgaactccgattgatgcgtatcaaattc
ttgtcagaagtagcaaactaa
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